RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 NRIP1P48552 1158 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 USP11P51784 963 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 HFE2Q6ZVN8 426 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 SLC24A5Q71RS6 500 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 ATP8B4Q8TF62 1192 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 CRYGNQ8WXF5 182 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 GINS2Q9Y248 185 aa17.27■□□□□ 0.36
RPL28-206ENST00000558752 CIITAP33076 1130 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 NEK4P51957 841 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 SCRN1Q12765 414 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 STK3Q13188 491 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 SUGP1Q8IWZ8 645 aaKnown RBP17.26■□□□□ 0.35
RPL28-206ENST00000558752 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 TRAPPC12Q8WVT3 735 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 WASF1Q92558 559 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 SNX27Q96L92 541 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
RPL28-206ENST00000558752 ZNF302Q9NR11 478 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 TLR9Q9NR96 1032 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 RGS18Q9NS28 235 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 TBC1D22BQ9NU19 505 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
RPL28-206ENST00000558752 TPCN1Q9ULQ1 816 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 PCDHA4Q9UN74 947 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
RPL28-206ENST00000558752 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 TBKBP1A7MCY6 615 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 HOXA2O43364 376 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 SEC24BO95487 1268 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ARP10275 920 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
RPL28-206ENST00000558752 IBSPP21815 317 aaPredicted RBP17.25■□□□□ 0.35
RPL28-206ENST00000558752 DNAJB1P25685 340 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 AK2P54819 239 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
RPL28-206ENST00000558752 PDXDC2PQ6P474 469 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
RPL28-206ENST00000558752 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 PBXIP1Q96AQ6 731 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ZBTB10Q96DT7 871 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 PGBD1Q96JS3 809 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ADAM2Q99965 735 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
RPL28-206ENST00000558752 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 CLEC1BQ9P126 229 aa17.25■□□□□ 0.35
RPL28-206ENST00000558752 STK36Q9NRP7 1315 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 ATG2AQ2TAZ0 1938 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 LOC730098B7Z3J9 87 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 LAG3P18627 525 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 CRYBB1P53674 252 aaPredicted RBP17.24■□□□□ 0.35
RPL28-206ENST00000558752 ITGB3BPQ13352 177 aaPredicted RBP17.24■□□□□ 0.35
RPL28-206ENST00000558752 TMEM266Q2M3C6 531 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 ABHD15Q6UXT9 468 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 TRIM67Q6ZTA4 783 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 CKAP2LQ8IYA6 745 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 BBXQ8WY36 941 aaPredicted RBP17.24■□□□□ 0.35
RPL28-206ENST00000558752 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 ELAC1Q9H777 363 aaKnown RBP17.24■□□□□ 0.35
RPL28-206ENST00000558752 TMEM161AQ9NX61 479 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
RPL28-206ENST00000558752 NOC2LQ9Y3T9 749 aaKnown RBP17.24■□□□□ 0.35
RPL28-206ENST00000558752 TMEM221A6NGB7 291 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 M0R296 226 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
RPL28-206ENST00000558752 FGF18O76093 207 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 PTPN5P54829 565 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 CBX2Q14781 532 aaPredicted RBP17.23■□□□□ 0.35
RPL28-206ENST00000558752 SMAP1Q8IYB5 467 aaPredicted RBP17.23■□□□□ 0.35
RPL28-206ENST00000558752 KIAA0319LQ8IZA0 1049 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 BLIDQ8IZY5 108 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 IRF2BPLQ9H1B7 796 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 BARX2Q9UMQ3 279 aaPredicted RBP17.23■□□□□ 0.35
RPL28-206ENST00000558752 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
RPL28-206ENST00000558752 LOXHD1Q8IVV2 1947 aa17.23■□□□□ 0.35
RPL28-206ENST00000558752 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 IPO5O00410 1097 aaKnown RBP17.22■□□□□ 0.35
RPL28-206ENST00000558752 MAGEB2O15479 319 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 ZSCAN20P17040 1043 aaPredicted RBP17.22■□□□□ 0.35
RPL28-206ENST00000558752 TMOD1P28289 359 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 ZXDAP98168 799 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 KRT17Q04695 432 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 BMS1Q14692 1282 aaKnown RBP17.22■□□□□ 0.35
RPL28-206ENST00000558752 SWSAP1Q6NVH7 229 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 ABI1Q8IZP0 508 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 METTL13Q8N6R0 699 aa17.22■□□□□ 0.35
RPL28-206ENST00000558752 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms