RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
SNRPA1-206ENST00000558059 LIMCH1Q9UPQ0 1083 aa9.91□□□□□ -0.82
SNRPA1-206ENST00000558059 SAMM50Q9Y512 469 aa9.91□□□□□ -0.82
SNRPA1-206ENST00000558059 INSL6Q9Y581 213 aa9.91□□□□□ -0.82
SNRPA1-206ENST00000558059 NLRC5Q86WI3 1866 aa9.91□□□□□ -0.82
SNRPA1-206ENST00000558059 LPXNO60711 386 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 UPP2O95045 317 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 STBD1O95210 358 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 OATP04181 439 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 CD52P31358 61 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 KRT2P35908 639 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 JAK3P52333 1124 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 ERVK-21P61565 698 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 PRKCEQ02156 737 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 MIER3Q7Z3K6 550 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 RTN4RL1Q86UN2 441 aaPredicted RBP9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 LINC01599Q8WXQ3 324 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 HAS1Q92839 578 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 FAM167AQ96KS9 214 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 TMX1Q9H3N1 280 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 PRDM6Q9NQX0 595 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 NRBP2Q9NSY0 501 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 PADI3Q9ULW8 664 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 MTCH2Q9Y6C9 303 aa9.9□□□□□ -0.82
SNRPA1-206ENST00000558059 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 M0QZ92 97 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 EML1O00423 815 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 MAGEB2O15479 319 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 CCNT1O60563 726 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 GPR32O75388 356 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 MMP1P03956 469 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 GCFC2P16383 781 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 FOSBP53539 338 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 GRB10Q13322 594 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 PPP2R5CQ13362 524 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 TARBP2Q15633 366 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 CCDC85BQ15834 202 aaPredicted RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 KRT40Q6A162 431 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 CRIPAKQ8N1N5 446 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 METTL13Q8N6R0 699 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 PPM1EQ8WY54 764 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 FAM20AQ96MK3 541 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 CEP89Q96ST8 783 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 SUGCTQ9HAC7 445 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 ERVK-5Q9HDB9 667 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 XIRP2A4UGR9 3374 aa9.89□□□□□ -0.83
SNRPA1-206ENST00000558059 RALGAPA2Q2PPJ7 1873 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 TMEM150BA6NC51 233 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 WNT7AO00755 349 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 TBX3O15119 743 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 VTNP04004 478 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 CLCN3P51790 818 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 PAK2Q13177 524 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 KIZQ2M2Z5 673 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 TMEM266Q2M3C6 531 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 EFCAB12Q6NXP0 572 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 CCDC83Q8IWF9 413 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 DIS3L2Q8IYB7 885 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 TMEM40Q8WWA1 233 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 YME1L1Q96TA2 773 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 NAP1L4Q99733 375 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 LLPHQ9BRT6 129 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 C17orf80Q9BSJ5 609 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 FTHL17Q9BXU8 183 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 NIFKQ9BYG3 293 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 MTUS1Q9ULD2 1270 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 GINS2Q9Y248 185 aa9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 NOC2LQ9Y3T9 749 aaKnown RBP9.88□□□□□ -0.83
SNRPA1-206ENST00000558059 FNDC1Q4ZHG4 1894 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 COL4A6Q14031 1691 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 TCF20Q9UGU0 1960 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 DLL1O00548 723 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 GTPBP6O43824 516 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 MGEA5O60502 916 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 RPS6KA5O75582 802 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 CRYBB1P53674 252 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 NLRP11P59045 1033 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 PSMC5P62195 406 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 SPIRE1Q08AE8 756 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 XKR3Q5GH77 459 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 GDPD5Q8WTR4 605 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 ZNF689Q96CS4 500 aaPredicted RBP9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 OSMRQ99650 979 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 ADAMTS10Q9H324 1103 aa9.87□□□□□ -0.83
SNRPA1-206ENST00000558059 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms