RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 YTHDC1Q96MU7 727 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 GPR101Q96P66 508 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 GBP4Q96PP9 640 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 RHOBTB2Q9BYZ6 727 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SPATA6Q9NWH7 488 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 CHPF2Q9P2E5 772 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 FTSJ1Q9UET6 329 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PRSS38A1L453 326 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 NRP2O60462 931 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 MMEP08473 750 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 LPOP22079 712 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 RPL13P26373 211 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 FXR1P51114 621 aaKnown RBP eCLIP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SLC5A3P53794 718 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PFKPQ01813 784 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TOP3AQ13472 1001 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PDCD1Q15116 288 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 B3GNT9Q6UX72 402 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TMC6Q7Z403 805 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ENKD1Q9H0I2 346 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 GPR45Q9Y5Y3 372 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 CDY2AQ9Y6F7 541 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 A0A1W2PR48 441 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ERC2O15083 957 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 KATNA1O75449 491 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PRPF6O94906 941 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TSPAN15O95858 294 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TACR1P25103 407 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PTX3P26022 381 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 CYP2C19P33261 490 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ITGA1P56199 1179 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SRSF3P84103 164 aaKnown RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ADCY2Q08462 1091 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 ZBTB41Q5SVQ8 909 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 IQSEC1Q6DN90 963 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 EP400NLQ6ZTU2 488 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TAS1R1Q7RTX1 841 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 UNC5BQ8IZJ1 945 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 AUTS2Q8WXX7 1259 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 DACT3Q96B18 629 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 FAM84AQ96KN4 292 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SIGLEC10Q96LC7 697 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 GORASP1Q9BQQ3 440 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 RTFDC1Q9BY42 306 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 KATNBL1Q9H079 304 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 TOPORSQ9NS56 1045 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 CCM2LQ9NUG4 571 aaPredicted RBP2.32□□□□□ -2.04
HIF1A-212ENST00000557538 PRSS50Q9UI38 385 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 SIT1Q9Y3P8 196 aa2.32□□□□□ -2.04
HIF1A-212ENST00000557538 KLHL33A6NCF5 533 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 NUDT19A8MXV4 375 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 AKAP10O43572 662 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 ZRANB2O95218 330 aaKnown RBP eCLIP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 POLD1P28340 1107 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 TMPRSS15P98073 1019 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 UGT8Q16880 541 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 VWA3BQ502W6 1294 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 SLFN12LQ6IEE8 588 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 BTNL9Q6UXG8 535 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 C11orf96Q7Z7L8 435 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 TMEM151BQ8IW70 566 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 ZC3H10Q96K80 434 aaKnown RBP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 DCP1AQ9NPI6 582 aaPredicted RBP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 PPP2R3BQ9Y5P8 575 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 A0A0A6YYK5 440 aaPredicted RBP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 MARCH6O60337 910 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 KDM1AO60341 852 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 KLHL18O94889 574 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 TAL1P17542 331 aaPredicted RBP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 PDE6BP35913 854 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 IL12RB1P42701 662 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 ETV4P43268 484 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP19-4Q3LI73 84 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 PITRM1Q5JRX3 1037 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 MBNL2Q5VZF2 373 aaKnown RBP2.31□□□□□ -2.04
HIF1A-212ENST00000557538 KLHL36Q8N4N3 616 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 MAGEB6Q8N7X4 407 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 CDYL2Q8N8U2 506 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 OR14C36Q8NHC7 312 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 HOOK2Q96ED9 719 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 BORCS6Q96GS4 357 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 CLIC6Q96NY7 704 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 SOX7Q9BT81 388 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 RIC8BQ9NVN3 520 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 BTG4Q9NY30 223 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 KLHL42Q9P2K6 505 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 MSRAQ9UJ68 235 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 PTPN22Q9Y2R2 807 aa2.31□□□□□ -2.04
HIF1A-212ENST00000557538 PRAMEF22A3QJZ6 481 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SLC16A6O15403 523 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SGTAO43765 313 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 DLG4P78352 724 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 IL13RA1P78552 427 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 ZNF200P98182 395 aaPredicted RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SLC6A3Q01959 620 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 SKIDA1Q1XH10 827 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 HSP90AB2PQ58FF8 381 aa2.3□□□□□ -2.04
HIF1A-212ENST00000557538 RRP12Q5JTH9 1297 aaKnown RBP2.3□□□□□ -2.04
HIF1A-212ENST00000557538 PRAMEF18Q5VWM3 479 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms