RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PIGOQ8TEQ8 1089 aa12.53□□□□□ -0.4
FOXN3-212ENST00000556541 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
FOXN3-212ENST00000556541 CLSTN2Q9H4D0 955 aa12.53□□□□□ -0.4
FOXN3-212ENST00000556541 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-212ENST00000556541 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
FOXN3-212ENST00000556541 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
FOXN3-212ENST00000556541 GRIN2DO15399 1336 aa12.53□□□□□ -0.4
FOXN3-212ENST00000556541 CENPFP49454 3210 aa12.52□□□□□ -0.4
FOXN3-212ENST00000556541 SMIM35A0A1B0GVV1 85 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 ARVCFO00192 962 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 CAND2O75155 1236 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 C22orf31O95567 290 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 TFRCP02786 760 aaKnown RBP12.52□□□□□ -0.41
FOXN3-212ENST00000556541 ZNF131P52739 623 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 ITGA7Q13683 1181 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 MCM6Q14566 821 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 RBM43Q6ZSC3 357 aaKnown RBP12.52□□□□□ -0.41
FOXN3-212ENST00000556541 UBE2Q1Q7Z7E8 422 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 C7orf31Q8N865 590 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 RETREG2Q8NC44 543 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 LMBR1Q8WVP7 490 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 SLC7A3Q8WY07 619 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 KIFAP3Q92845 792 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
FOXN3-212ENST00000556541 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 MTRQ99707 1265 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 STARD7Q9NQZ5 370 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
FOXN3-212ENST00000556541 SIP14410 1827 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 C17orf102A2RUQ5 167 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ZBTB39O15060 712 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ASAP2O43150 1006 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 MARK3P27448 753 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ABCD1P33897 745 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 NPEPPSP55786 919 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 RBL2Q08999 1139 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 KCNB1Q14721 858 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 EMC2Q15006 297 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 POSTNQ15063 836 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
FOXN3-212ENST00000556541 MTERF2Q49AM1 385 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 IER5Q5VY09 327 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 PLA2G4FQ68DD2 849 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 MTHFD1LQ6UB35 978 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 ANKRD33Q7Z3H0 272 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 NME8Q8N427 588 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 TOX2Q96NM4 488 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 GSDMAQ96QA5 445 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 XPNPEP1Q9NQW7 623 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
FOXN3-212ENST00000556541 HDAC6Q9UBN7 1215 aa12.51□□□□□ -0.41
FOXN3-212ENST00000556541 MYMKA6NI61 221 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 MAPTP10636 758 aaKnown RBP12.5□□□□□ -0.41
FOXN3-212ENST00000556541 GAP43P17677 238 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 TMOD1P28289 359 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
FOXN3-212ENST00000556541 DNM2P50570 870 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-212ENST00000556541 EHHADHQ08426 723 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 DPYDQ12882 1025 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 MAPK7Q13164 816 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 GIT2Q14161 759 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
FOXN3-212ENST00000556541 CCDC183Q5T5S1 534 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 UNC13DQ70J99 1090 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 SERINC5Q86VE9 423 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 DDX12PQ92771 950 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 PLIN2Q99541 437 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 NTPCRQ9BSD7 190 aaKnown RBP12.5□□□□□ -0.41
FOXN3-212ENST00000556541 RUSC1Q9BVN2 902 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 NFKBIZQ9BYH8 718 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
FOXN3-212ENST00000556541 LETM1O95202 739 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-212ENST00000556541 SMC2O95347 1197 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 KLRC1P26715 233 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 ARL2P36404 184 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 PSMD2Q13200 908 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 PTK7Q13308 1070 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms