RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 KANSL1Q7Z3B3 1105 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 FAM129CQ86XR2 697 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 CALML6Q8TD86 181 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 LMBR1Q8WVP7 490 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 AHCYL2Q96HN2 611 aaKnown RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 ZNF496Q96IT1 587 aaPredicted RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 FMNL2Q96PY5 1086 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 ORAI2Q96SN7 254 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 SYT3Q9BQG1 590 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 MS4A5Q9H3V2 200 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 EPB41L4AQ9HCS5 686 aaPredicted RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 KCND1Q9NSA2 647 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 ARHGAP20Q9P2F6 1191 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 MSRAQ9UJ68 235 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 NOC2LQ9Y3T9 749 aaKnown RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 RNF114Q9Y508 228 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 IRAK3Q9Y616 596 aa4.58□□□□□ -1.68
SRP54-209ENST00000555746 SETD1AO15047 1707 aaKnown RBP4.58□□□□□ -1.68
SRP54-209ENST00000555746 NUP160Q12769 1436 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 PRG4Q92954 1404 aaPredicted RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 PAX4O43316 350 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 KDM1AO60341 852 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 RAB11FIP3O75154 756 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 CYP7B1O75881 506 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 TSPAN15O95858 294 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 ECE1P42892 770 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 ROM1Q03395 351 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 MYBPC3Q14896 1274 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 RTP5Q14D33 572 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 PDCD1Q15116 288 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 KANK2Q63ZY3 851 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 OGFOD2Q6N063 350 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 ESPNLQ6ZVH7 1005 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 CXXC5Q7LFL8 322 aaKnown RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 CBARPQ8N350 705 aaPredicted RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 C7orf31Q8N865 590 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 FNIP1Q8TF40 1166 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 ERCC4Q92889 916 aaPredicted RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 CLIC6Q96NY7 704 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 ACAP3Q96P50 834 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 WNT8AQ9H1J5 351 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 OR10A5Q9H207 317 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 SEMA4AQ9H3S1 761 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 CD320Q9NPF0 282 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 TOPORSQ9NS56 1045 aaPredicted RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 TRHDEQ9UKU6 1024 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 SPEF1Q9Y4P9 236 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 PMF1-BGLAPU3KQ54 211 aa4.57□□□□□ -1.68
SRP54-209ENST00000555746 RIMS1Q86UR5 1692 aaKnown RBP4.57□□□□□ -1.68
SRP54-209ENST00000555746 PLB1Q6P1J6 1458 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 RAD54L2Q9Y4B4 1467 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 SOGA1O94964 1423 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 TRIM75PA6NK02 468 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 ELL2O00472 640 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 GABRDO14764 452 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 PRPF6O94906 941 aaKnown RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 COL6A1P12109 1028 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 APEX1P27695 318 aaKnown RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 MANFP55145 182 aaKnown RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 KRT85P78386 507 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 IL13RA1P78552 427 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 SLC6A3Q01959 620 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 DLX2Q07687 328 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 ITKQ08881 620 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 KLF1Q13351 362 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 SSPNQ14714 243 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 SLFN12LQ6IEE8 588 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 KIAA1841Q6NSI8 718 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 TIGD7Q6NT04 549 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 LRSAM1Q6UWE0 723 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 DPP8Q6V1X1 898 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 ATG14Q6ZNE5 492 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 SAPCD2Q86UD0 394 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 ZBTB8AQ96BR9 441 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 MTMR8Q96EF0 704 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 TUBGCP5Q96RT8 1024 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 CEP89Q96ST8 783 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 MYL10Q9BUA6 226 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 CCDC8Q9H0W5 538 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 SPATA6Q9NWH7 488 aaPredicted RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 C14orf119Q9NWQ9 140 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 ZFP69BQ9UJL9 534 aa4.56□□□□□ -1.68
SRP54-209ENST00000555746 SMG5Q9UPR3 1016 aaKnown RBP4.56□□□□□ -1.68
SRP54-209ENST00000555746 WASHC2AQ641Q2 1341 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 TCAF2A6NFQ2 919 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 FBXO21O94952 628 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 KNG1P01042 644 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 C1QTNF9P0C862 333 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 RPL13P26373 211 aaKnown RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 GPR3P46089 330 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 RGS3P49796 1198 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 BCAR1P56945 870 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 FSCN1Q16658 493 aaKnown RBP4.55□□□□□ -1.68
SRP54-209ENST00000555746 VWA3BQ502W6 1294 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 ZBTB41Q5SVQ8 909 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 CNKSR3Q6P9H4 555 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 STK32CQ86UX6 486 aa4.55□□□□□ -1.68
SRP54-209ENST00000555746 ZSWIM3Q96MP5 696 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms