RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	ORC2	Q13416	577 aa	Predicted RBP	10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	FAM173B	Q6P4H8	233 aa		10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	MIER3	Q7Z3K6	550 aa		10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	LINC01465	Q8N7H1	131 aa		10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	ANP32E	Q9BTT0	268 aa		10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	CELF4	Q9BZC1	486 aa	Known RBP	10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	AGO3	Q9H9G7	860 aa	Known RBP	10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	CUL9	Q8IWT3	2517 aa		10.8	□□□□□ -0.68
ACTN1-215	ENST00000555616	EPOP	A6NHQ4	379 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	MAGEB2	O15479	319 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	CCNT1	O60563	726 aa	Known RBP	10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	ATP2B1	P20020	1258 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	POU3F3	P20264	500 aa	Predicted RBP	10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	CD52	P31358	61 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	SPIRE1	Q08AE8	756 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	STK38	Q15208	465 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	TARBP2	Q15633	366 aa	Known RBP	10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	XKR3	Q5GH77	459 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	TTC38	Q5R3I4	469 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	FAM117B	Q6P1L5	589 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	SPRED2	Q7Z698	418 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	POTED	Q86YR6	584 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	LINC01599	Q8WXQ3	324 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	HAS1	Q92839	578 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	TOP1MT	Q969P6	601 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	SPATA32	Q96LK8	384 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	USP28	Q96RU2	1077 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	FTHL17	Q9BXU8	183 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616	INSL6	Q9Y581	213 aa		10.79	□□□□□ -0.68
ACTN1-215	ENST00000555616		A0A0C4DFX4	3053 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	PRUNE2	Q8WUY3	3088 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	DDX11L8	A8MPP1	907 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	STBD1	O95210	358 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	YEATS4	O95619	227 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	PTMS	P20962	102 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	NASP	P49321	788 aa	Predicted RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	TOB1	P50616	345 aa	Predicted RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	ERVK-21	P61565	698 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	CEBPZ	Q03701	1054 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	PAK2	Q13177	524 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	SF3A1	Q15459	793 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	NFKBIB	Q15653	356 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	ZNF710	Q8N1W2	664 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	KCNG4	Q8TDN1	519 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	TMEM40	Q8WWA1	233 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	ARNTL2	Q8WYA1	636 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	TGS1	Q96RS0	853 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	YME1L1	Q96TA2	773 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	NIFK	Q9BYG3	293 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	CERS4	Q9HA82	394 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	RC3H2	Q9HBD1	1191 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	ERVK-5	Q9HDB9	667 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	NRBP2	Q9NSY0	501 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	TFIP11	Q9UBB9	837 aa	Known RBP	10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	PADI3	Q9ULW8	664 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	MYH15	Q9Y2K3	1946 aa		10.78	□□□□□ -0.68
ACTN1-215	ENST00000555616	EML1	O00423	815 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	WNT7A	O00755	349 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	ENPP3	O14638	875 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	LPXN	O60711	386 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	GPR32	O75388	356 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	IGFBP4	P22692	258 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	MCM7	P33993	719 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	CLCN3	P51790	818 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	CRYBB1	P53674	252 aa	Predicted RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	PSMC5	P62195	406 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	TBC1D8B	Q0IIM8	1120 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	KIZ	Q2M2Z5	673 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	SLFN12	Q8IYM2	578 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	CRIPAK	Q8N1N5	446 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	METTL13	Q8N6R0	699 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	BANK1	Q8NDB2	785 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	LEO1	Q8WVC0	666 aa	Predicted RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	CEP89	Q96ST8	783 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	MAP7D2	Q96T17	732 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	ADAMTS10	Q9H324	1103 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	TMX1	Q9H3N1	280 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	NOC2L	Q9Y3T9	749 aa	Known RBP	10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	PCDHB6	Q9Y5E3	794 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	CLIC4	Q9Y696	253 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	ADGRA3	Q8IWK6	1321 aa		10.77	□□□□□ -0.69
ACTN1-215	ENST00000555616	KAT6A	Q92794	2004 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	IGKV6-21	A0A0C4DH24	114 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	TMEM150B	A6NC51	233 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	GOLGA6L4	A6NEF3	574 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	RFXAP	O00287	272 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	LAD1	O00515	517 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	SPTLC2	O15270	562 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	NEMF	O60524	1076 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	VTN	P04004	478 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	LINC00271	P0C7V0	271 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	TMOD1	P28289	359 aa		10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	QARS	P47897	775 aa	Known RBP	10.76	□□□□□ -0.69
ACTN1-215	ENST00000555616	ME1	P48163	572 aa		10.76	□□□□□ -0.69

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