RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 ADCY5O95622 1261 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 INSRRP14616 1297 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 DRP2Q13474 957 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 PCIF1Q9H4Z3 704 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.6
NEK9-205ENST00000555405 HTTP42858 3142 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 RHOBTB3O94955 611 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.61
NEK9-205ENST00000555405 DGKDQ16760 1214 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 CSGALNACT2Q8N6G5 542 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 TRPV1Q8NER1 839 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 POLR3FQ9H1D9 316 aaPredicted RBP11.27□□□□□ -0.61
NEK9-205ENST00000555405 LARSQ9P2J5 1176 aaKnown RBP11.27□□□□□ -0.61
NEK9-205ENST00000555405 AKT3Q9Y243 479 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 MYADML2A6NDP7 307 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 ZNF865P0CJ78 1059 aaPredicted RBP11.27□□□□□ -0.61
NEK9-205ENST00000555405 RARBP10826 455 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 CEP135Q66GS9 1140 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 DHX40Q8IX18 779 aaKnown RBP11.27□□□□□ -0.61
NEK9-205ENST00000555405 ERO1AQ96HE7 468 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 VPS16Q9H269 839 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
NEK9-205ENST00000555405 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 AKR1A1P14550 325 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 IQCB1Q15051 598 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 KIAA0753Q2KHM9 967 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 FILIP1Q7Z7B0 1213 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
NEK9-205ENST00000555405 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 ERAP1Q9NZ08 941 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 IFNKQ9P0W0 207 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 PVALEFA0A1B0GWK0 134 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
NEK9-205ENST00000555405 KLRC1P26715 233 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 CYP2J2P51589 502 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 EMC2Q15006 297 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 PLCB4Q15147 1175 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
NEK9-205ENST00000555405 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 KMT5AQ9NQR1 393 aa11.26□□□□□ -0.61
NEK9-205ENST00000555405 TISP43B9A030 160 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 HOXC6P09630 235 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 FSCN1Q16658 493 aaKnown RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 EFCAB12Q6NXP0 572 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 RDM1Q8NG50 284 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 KATNBL1Q9H079 304 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 XPNPEP3Q9NQH7 507 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 ANKEF1Q9NU02 776 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 MAGEC2Q9UBF1 373 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 ZNF215Q9UL58 517 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 AP5Z1O43299 807 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 MMP3P08254 477 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 GRK4P32298 578 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 MTIF2P46199 727 aaKnown RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 PPFIA1Q13136 1202 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 TCERG1LQ5VWI1 586 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 USP6NLQ92738 828 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.61
NEK9-205ENST00000555405 TAB2Q9NYJ8 693 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 MAFBQ9Y5Q3 323 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 VTNP04004 478 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 INHAP05111 366 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 SMTNP53814 917 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 DMP1Q13316 513 aaPredicted RBP11.25□□□□□ -0.61
NEK9-205ENST00000555405 KCNB1Q14721 858 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 CCDC40Q4G0X9 1142 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 DAW1Q8N136 415 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 SPATA20Q8TB22 786 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 P2RX5Q93086 422 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 TSG101Q99816 390 aa11.25□□□□□ -0.61
NEK9-205ENST00000555405 GOLGA8IPA6NC78 632 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 GOLGA8JA6NMD2 632 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 INO80B-WBP1J3KQ70 363 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 DGAT1O75907 488 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 MYL1P05976 194 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 UBASH3AP57075 661 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 NT5DC1Q5TFE4 455 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 HAUS6Q7Z4H7 955 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
NEK9-205ENST00000555405 MED15Q96RN5 788 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms