RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 CFAP100Q494V2 611 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 MFSD14BQ5SR56 506 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 CYP4F22Q6NT55 531 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 DLK2Q6UY11 383 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 FAM181AQ8N9Y4 354 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 LRRN4CLQ8ND94 238 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 BVESQ8NE79 360 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 WDR66Q8TBY9 1149 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SYTL5Q8TDW5 730 aaPredicted RBP5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SSH3Q8TE77 659 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 RCC1LQ96I51 464 aaKnown RBP5.09□□□□□ -1.59
CPSF2-204ENST00000555244 TEPSINQ96N21 525 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 GPR62Q9BZJ7 368 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 DEFB129Q9H1M3 183 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 CHST7Q9NS84 486 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 GFOD1Q9NXC2 390 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SAGE1Q9NXZ1 904 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SUSD2Q9UGT4 822 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 AKT3Q9Y243 479 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SF3B6Q9Y3B4 125 aaKnown RBP5.09□□□□□ -1.59
CPSF2-204ENST00000555244 SNX11Q9Y5W9 270 aa5.09□□□□□ -1.59
CPSF2-204ENST00000555244 PAPPA2Q9BXP8 1791 aa5.09□□□□□ -1.6
CPSF2-204ENST00000555244 MAST3O60307 1309 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 PNMA6EA0A0J9YXQ4 647 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SRGAP3O43295 1099 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 PAX4O43316 350 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 MYO1BO43795 1136 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 PLIN1O60240 522 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SMARCA5O60264 1052 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 CLSTN1O94985 981 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 GSNP06396 782 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 HSPA8P11142 646 aaKnown RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SLC5A1P13866 664 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 TM4SF4P48230 202 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF445P59923 1031 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SNW1Q13573 536 aaKnown RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 HSP90AA2PQ14568 343 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 ATP2B3Q16720 1220 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SUPT20HL1Q3ZLR7 823 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 ZC3H12BQ5HYM0 836 aaKnown RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 CDKAL1Q5VV42 579 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 CWF19L1Q69YN2 538 aaKnown RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 APOBEC3HQ6NTF7 200 aaKnown RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SPATC1Q76KD6 591 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 TMC3Q7Z5M5 1100 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 THAP5Q7Z6K1 395 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 FAM83AQ86UY5 434 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 TMEM57Q8N5G2 664 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 DAGLBQ8NCG7 672 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 ADCY4Q8NFM4 1077 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 THAP3Q8WTV1 239 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 SPATA9Q9BWV2 254 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF70Q9UC06 446 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-204ENST00000555244 CCDC39Q9UFE4 941 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 PFDN2Q9UHV9 154 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 TNNQ9UQP3 1299 aa5.08□□□□□ -1.6
CPSF2-204ENST00000555244 RPAP1Q9BWH6 1393 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ECM29Q5VYK3 1845 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 GAKO14976 1311 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 AOX1Q06278 1338 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ARAP2Q8WZ64 1704 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 SSU72P8A0A1W2PR75 194 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 PRAMEF1O95521 474 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 MAP4K4O95819 1239 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 SRFP11831 508 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 NF2P35240 595 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 INHBEP58166 350 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 POU4F1Q01851 419 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 TNFAIP1Q13829 316 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 NKPD1Q17RQ9 610 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 LONRF2Q1L5Z9 754 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 TMED8Q6PL24 325 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ARMC9Q7Z3E5 817 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 RASAL3Q86YV0 1011 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 SPACA3Q8IXA5 215 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 TP53INP2Q8IXH6 220 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 FIBCD1Q8N539 461 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ZGPATQ8N5A5 531 aaKnown RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF655Q8N720 491 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 SH3TC2Q8TF17 1288 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ASB11Q8WXH4 323 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 FRAT1Q92837 279 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 BRF1Q92994 677 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 HRASLS5Q96KN8 279 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 HSPA12BQ96MM6 686 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 IPO9Q96P70 1041 aaKnown RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 HDAC8Q9BY41 377 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 DUSP15Q9H1R2 295 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 NOL6Q9H6R4 1146 aaKnown RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 GNL3LQ9NVN8 582 aaKnown RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 ZSWIM5Q9P217 1185 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 APEX2Q9UBZ4 518 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 CGGBP1Q9UFW8 167 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 DENND2AQ9ULE3 1009 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 PA2G4Q9UQ80 394 aaKnown RBP5.07□□□□□ -1.6
CPSF2-204ENST00000555244 PCDHAC2Q9Y5I4 1007 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms