RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZNF445P59923 1031 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 GPNMBQ14956 572 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 PWP2Q15269 919 aaKnown RBP16.19■□□□□ 0.18
SHMT2-208ENST00000553868 KRT79Q5XKE5 535 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 TRIM67Q6ZTA4 783 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 NLRX1Q86UT6 975 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
SHMT2-208ENST00000553868 FBXO16Q8IX29 292 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-208ENST00000553868 ELOA2Q8IYF1 753 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-208ENST00000553868 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 CNNM3Q8NE01 707 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 FBXO22Q8NEZ5 403 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 ERMNQ8TAM6 284 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 HAS1Q92839 578 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 LENG9Q96B70 501 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 PABPC5Q96DU9 382 aaKnown RBP16.19■□□□□ 0.18
SHMT2-208ENST00000553868 CALML4Q96GE6 196 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 CDHR1Q96JP9 859 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 UBIAD1Q9Y5Z9 338 aa16.19■□□□□ 0.18
SHMT2-208ENST00000553868 MSH4O15457 936 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 POLR2DO15514 142 aaKnown RBP16.18■□□□□ 0.18
SHMT2-208ENST00000553868 MAFGO15525 162 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 GJB5O95377 273 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 NR3C2P08235 984 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-208ENST00000553868 CABP7Q86V35 215 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 MRPL38Q96DV4 380 aaKnown RBP16.18■□□□□ 0.18
SHMT2-208ENST00000553868 RIT2Q99578 217 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 RAD9AQ99638 391 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 PRRX2Q99811 253 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 CLDND1Q9NY35 253 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 FAM50BQ9Y247 325 aa16.18■□□□□ 0.18
SHMT2-208ENST00000553868 H0Y858 1186 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 MYL3P08590 195 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 LTBRP36941 435 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 MTMR1Q13613 665 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 STXBP2Q15833 593 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 NBPF20Q3BBV1 942 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 RRAGBQ5VZM2 374 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 TAPT1Q6NXT6 567 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 FAM133AQ8N9E0 248 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 SLC5A5Q92911 643 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 CDK5RAP3Q96JB5 506 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 KDM3AQ9Y4C1 1321 aa16.17■□□□□ 0.18
SHMT2-208ENST00000553868 SYCE3A1L190 88 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 GAS7O60861 476 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 SLFN14P0C7P3 912 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 ITGB5P18084 799 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 STAT6P42226 847 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 ID4P47928 161 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 MRPS9P82933 396 aaKnown RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 DLX2Q07687 328 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 CAMK4Q16566 473 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 RBM43Q6ZSC3 357 aaKnown RBP16.16■□□□□ 0.18
SHMT2-208ENST00000553868 USP49Q70CQ1 688 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 FBXL6Q8N531 539 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 PDILTQ8N807 584 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 DHX58Q96C10 678 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
SHMT2-208ENST00000553868 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 IPO5O00410 1097 aaKnown RBP16.15■□□□□ 0.18
SHMT2-208ENST00000553868 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
SHMT2-208ENST00000553868 PDE4DQ08499 809 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 COL19A1Q14993 1142 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 SMAD2Q15796 467 aaKnown RBP16.15■□□□□ 0.18
SHMT2-208ENST00000553868 LONRF3Q496Y0 759 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 SASS6Q6UVJ0 657 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 LRSAM1Q6UWE0 723 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 INPP4AQ96PE3 977 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-208ENST00000553868 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 TBC1D22BQ9NU19 505 aa16.15■□□□□ 0.18
SHMT2-208ENST00000553868 STK17AQ9UEE5 414 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms