RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 CEMIPQ8WUJ3 1361 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8IPA6NC78 632 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 SORBS3O60504 671 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 STAT2P52630 851 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 TRIM55Q9BYV6 548 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 SCINQ9Y6U3 715 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 STK4Q13043 487 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 GRAPQ13588 217 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 PDZD4Q76G19 769 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 FRMD5Q7Z6J6 570 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 H0Y3Z8 333 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 CCDC93Q567U6 631 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 NRBP2Q9NSY0 501 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ABCD1P33897 745 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ERVK-24P63145 666 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 NCAPHQ15003 741 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 CCDC137Q6PK04 289 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PFDN4Q9NQP4 134 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 FGFR1OP2Q9NVK5 253 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 STOML1Q9UBI4 398 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 GGPS1O95749 300 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 KRT14P02533 472 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PDIA5Q14554 519 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 TRAPPC11Q7Z392 1133 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 MAML1Q92585 1016 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 LRRC37BQ96QE4 947 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 SEPT10Q9P0V9 454 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PFASO15067 1338 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 A0A0G2JND7 137 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 A6NJR5 290 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 TJP3O95049 919 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 PPP2R5CQ13362 524 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 DARS2Q6PI48 645 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ETNK1Q9HBU6 452 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 GINM1Q9NU53 330 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 INTUQ9ULD6 942 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 GYG2O15488 501 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ANXA13P27216 316 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 SOX5P35711 763 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 GCLMP48507 274 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 LRRC14Q15048 493 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 ATG16L1Q676U5 607 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
NPC1L1-204ENST00000546276 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms