RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 VAV1P15498 845 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ZKSCAN1P17029 563 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KCNA6P17658 529 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KCNA3P22001 575 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 IL10P22301 178 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PDE6BP35913 854 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TRIM23P36406 574 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PPARGP37231 505 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 MSH2P43246 934 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PTDSS1P48651 473 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 NLRP12P59046 1061 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 MRPS15P82914 257 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR20EP86478 221 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR20CP86479 221 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR20DP86480 221 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR20BP86481 221 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR20AP86496 221 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 RIPPLY1Q0D2K3 151 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ARID5BQ14865 1188 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ME3Q16798 604 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KRT71Q3SY84 523 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SPRYD7Q5W111 196 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PPP2R2DQ66LE6 453 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KCTD16Q68DU8 428 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF787Q6DD87 383 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 OTUD7BQ6GQQ9 843 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SNRNP48Q6IEG0 339 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PHLDB3Q6NSJ2 640 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CORO6Q6QEF8 472 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PRR23CQ6ZRP0 262 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CCDC129Q6ZRS4 1044 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TRIM67Q6ZTA4 783 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 DHX32Q7L7V1 743 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 KRT27Q7Z3Y8 459 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 NET1Q7Z628 596 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ITIH5Q86UX2 942 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 DHX40Q8IX18 779 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 AGGF1Q8N302 714 aaeCLIP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 LILRB2Q8N423 598 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TCP11L2Q8N4U5 519 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 MREGQ8N565 214 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TERB1Q8NA31 727 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SLC16A10Q8TF71 515 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 OSCP1Q8WVF1 389 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 LPIN2Q92539 896 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 GLMNQ92990 594 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 VTI1AQ96AJ9 217 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 FAM136AQ96C01 138 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SGF29Q96ES7 293 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF496Q96IT1 587 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PAWRQ96IZ0 340 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ATP6V1G3Q96LB4 118 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CEP295NLQ96MC4 621 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 WDR24Q96S15 920 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 LPIN3Q9BQK8 851 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 IER2Q9BTL4 223 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ABCG4Q9H172 646 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SMARCAD1Q9H4L7 1026 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TAF1DQ9H5J8 278 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CCSER2Q9H7U1 834 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 DCLRE1BQ9H816 532 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PLGRKTQ9HBL7 147 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 XAB2Q9HCS7 855 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CD93Q9NPY3 652 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CCDC177Q9NQR7 707 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 C8orf4Q9NR00 106 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PANK4Q9NVE7 773 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TNFRSF10DQ9UBN6 386 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TBK1Q9UHD2 729 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SFMBT1Q9UHJ3 866 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 VANGL2Q9ULK5 521 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CFL2Q9Y281 166 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 LEMD3Q9Y2U8 911 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 ANGPTL3Q9Y5C1 460 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 USH1CQ9Y6N9 552 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 GCC2Q8IWJ2 1684 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 A0A1W2PRQ8 180 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 FAM170AA1A519 330 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 RCCD1A6NED2 376 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 B8ZZF3 427 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 RASA4BC9J798 803 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 O00370 1275 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 PFDN6O15212 129 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 TLR3O15455 904 aaKnown RBP5.57□□□□□ -1.52
SNHG1-218ENST00000541615 RASA4O43374 803 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 EXTL3O43909 919 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 ORC4O43929 436 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 TJP3O95049 919 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 ECDO95905 644 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-218ENST00000541615 CHRNB1P11230 501 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 ALAS1P13196 640 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 SERPINB3P29508 390 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 TSPAN7P41732 249 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 SLC1A1P43005 524 aa5.57□□□□□ -1.52
SNHG1-218ENST00000541615 CBX5P45973 191 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms