RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 CCDC113Q9H0I3 377 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 ERVK-5Q9HDB9 667 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 AMFRQ9UKV5 643 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 NFS1Q9Y697 457 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 GAKO14976 1311 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 GMNCA6NCL1 334 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 SHBGP04278 402 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 STAT1P42224 750 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 SLCO1A2P46721 670 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 PLTPP55058 493 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 ZNF746Q6NUN9 644 aaPredicted RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 CCDC121Q6ZUS5 278 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 FRMD5Q7Z6J6 570 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 NT5DC3Q86UY8 548 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 KIAA0825Q8IV33 1275 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 CD302Q8IX05 232 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 ACTRT1Q8TDG2 376 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 ARHGEF26Q96DR7 871 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 DNAJC12Q9UKB3 198 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 PNMA2Q9UL42 364 aa17.31■□□□□ 0.36
CACFD1-206ENST00000540581 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
CACFD1-206ENST00000540581 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 FNTAP49354 379 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 NT5C2P49902 561 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 CUL1Q13616 776 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 DRAP1Q14919 205 aaPredicted RBP17.3■□□□□ 0.36
CACFD1-206ENST00000540581 HYIQ5T013 277 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 CPLX4Q7Z7G2 160 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 ERMNQ8TAM6 284 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 RAPGEF5Q92565 580 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 FAM13AO94988 1023 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 NOVP48745 357 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 FAM186BQ8IYM0 893 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 CCDC26Q8TAB7 109 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 TBC1D22AQ8WUA7 517 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
CACFD1-206ENST00000540581 RABGAP1Q9Y3P9 1069 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 SPIRE1Q08AE8 756 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 TMC3Q7Z5M5 1100 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 SYT2Q8N9I0 419 aaPredicted RBP17.3■□□□□ 0.36
CACFD1-206ENST00000540581 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 THAP2Q9H0W7 228 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
CACFD1-206ENST00000540581 LOC102724159A0A0B4J2E5 919 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 MSH4O15457 936 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CAND2O75155 1236 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PPP2R2AP63151 447 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PWP2Q15269 919 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CBWD6Q4V339 395 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CBWD3Q5JTY5 395 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CBWD5Q5RIA9 395 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PPP1R18Q6NYC8 613 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 ARFGAP2Q8N6H7 521 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 ETNPPLQ8TBG4 499 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 DNAJC18Q9H819 358 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 DCAF12L1Q5VU92 463 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 CTNNBL1Q8WYA6 563 aaPredicted RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 EIF2AK1Q9BQI3 630 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 PCIF1Q9H4Z3 704 aa17.29■□□□□ 0.36
CACFD1-206ENST00000540581 TYW1Q9NV66 732 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 BZW2Q9Y6E2 419 aaKnown RBP17.29■□□□□ 0.36
CACFD1-206ENST00000540581 DDX39AO00148 427 aaKnown RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 LMBR1Q8WVP7 490 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 FMO2Q99518 471 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 DBNDD1Q9H9R9 158 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 HAUS2Q9NVX0 235 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 DDTLA6NHG4 134 aaPredicted RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 A6NNZ2 444 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 TISP43B9A030 160 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 PDXKO00764 312 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 RPA1P27694 616 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 TUBB8Q3ZCM7 444 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 CEP57Q86XR8 500 aa17.28■□□□□ 0.36
CACFD1-206ENST00000540581 SUGP1Q8IWZ8 645 aaKnown RBP17.28■□□□□ 0.36
CACFD1-206ENST00000540581 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.36
CACFD1-206ENST00000540581 CFBP00751 764 aa17.27■□□□□ 0.36
CACFD1-206ENST00000540581 TNFAIP3P21580 790 aa17.27■□□□□ 0.36
CACFD1-206ENST00000540581 IFNAR2P48551 515 aa17.27■□□□□ 0.36
CACFD1-206ENST00000540581 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
CACFD1-206ENST00000540581 DR1Q01658 176 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms