RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MTHFD1LQ6UB35 978 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 LINC00114Q6XXX2 140 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 DDX46Q7L014 1031 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 PIGWQ7Z7B1 504 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CPLX4Q7Z7G2 160 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CCDC84Q86UT8 332 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 HOOK3Q86VS8 718 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ZSCAN29Q8IWY8 852 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 DIS3L2Q8IYB7 885 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 LZICQ8WZA0 190 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 SYN2Q92777 582 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 CLP1Q92989 425 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 TNFRSF25Q93038 417 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 TBC1D31Q96DN5 1066 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CHMP6Q96FZ7 201 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 PBKQ96KB5 322 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CAPZA3Q96KX2 299 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CCDC42Q96M95 316 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 NOX5Q96PH1 765 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CUEDC2Q9H467 287 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 NHEJ1Q9H9Q4 299 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 EXOC1Q9NV70 894 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 HAUS2Q9NVX0 235 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 LRFN2Q9ULH4 789 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 RASSF10A6NK89 507 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 ENO4A6NNW6 628 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 GOLGA8AA7E2F4 631 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 H0YGN5 161 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 RBAK-RBAKDNI3L0D1 243 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 O00370 1275 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 RNMTO43148 476 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 FGFR1OPO95684 399 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 BAG3O95817 575 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 ABL1P00519 1130 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 GSTA2P09210 222 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 DRD4P21917 467 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 ANXA13P27216 316 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 PAPOLAP51003 745 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 RAB27AP51159 221 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 BYSLQ13895 437 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 SKIDA1Q1XH10 827 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 RRAGBQ5VZM2 374 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 GPAT2Q6NUI2 795 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 HIBCHQ6NVY1 386 aaPredicted RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 C16orf46Q6P387 395 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 TXNDC2Q86VQ3 553 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 LMNTD2Q8IXW0 634 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 RPUSD2Q8IZ73 545 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 ADSSL1Q8N142 457 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 GALNT15Q8N3T1 639 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 NELFBQ8WX92 580 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 IP6K1Q92551 441 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 RRP36Q96EU6 259 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 EDC3Q96F86 508 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 RNF26Q9BY78 433 aaPredicted RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 IFIH1Q9BYX4 1025 aaKnown RBP7.32□□□□□ -1.24
USP28-207ENST00000538475 GSX2Q9BZM3 304 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 FAM129AQ9BZQ8 928 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 KRT23Q9C075 422 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 CSRNP2Q9H175 543 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 VPS16Q9H269 839 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 SLC39A2Q9NP94 309 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 KCNMB3Q9NPA1 279 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 FAM114A2Q9NRY5 505 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 SLC5A4Q9NY91 659 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 RGL1Q9NZL6 768 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 ZFATQ9P243 1243 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 CTNND2Q9UQB3 1225 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 PLAAQ9Y263 795 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 SH3BP1Q9Y3L3 701 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 LRRC42Q9Y546 428 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 PCDHA13Q9Y5I0 950 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 NFS1Q9Y697 457 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 EID1Q9Y6B2 187 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 KAT6BQ8WYB5 2073 aa7.32□□□□□ -1.24
USP28-207ENST00000538475 AFF2P51816 1311 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 PNPLA7Q6ZV29 1317 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 LRRD1A4D1F6 860 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 B4DLN1 442 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 SART1O43290 800 aaKnown RBP7.31□□□□□ -1.24
USP28-207ENST00000538475 SRGAP2O75044 1071 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 HEXIM1O94992 359 aaKnown RBP7.31□□□□□ -1.24
USP28-207ENST00000538475 KRT14P02533 472 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
USP28-207ENST00000538475 NFKB1P19838 968 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 ATP2B4P23634 1241 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 RXRBP28702 533 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 LONP1P36776 959 aaKnown RBP7.31□□□□□ -1.24
USP28-207ENST00000538475 CCT6AP40227 531 aaKnown RBP7.31□□□□□ -1.24
USP28-207ENST00000538475 MAGEA8P43361 318 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 NT5C2P49902 561 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 SEC24CP53992 1094 aa7.31□□□□□ -1.24
USP28-207ENST00000538475 LACTBP83111 547 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms