RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PRAMEF19Q5SWL8 479 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FAM102BQ5T8I3 360 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 GLG1Q92896 1179 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TIPINQ9BVW5 301 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CBFA2T2O43439 604 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 GH1P01241 217 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 MARK3P27448 753 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CCDC144BQ3MJ40 725 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ZNF720Q7Z2F6 126 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SOCS4Q8WXH5 440 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 XPNPEP1Q9NQW7 623 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PDLIM7Q9NR12 457 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LARSQ9P2J5 1176 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 A0A1B0GTH6 734 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ADCY6O43306 1168 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PLS3P13797 630 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SMPD1P17405 629 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CYP2C19P33261 490 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 RGS2P41220 211 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SPAG1Q07617 926 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LAMC2Q13753 1193 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 KNOP1Q1ED39 458 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 BMT2Q1RMZ1 405 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 KSR1Q8IVT5 923 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ZNF507Q8TCN5 953 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 NOC3LQ8WTT2 800 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 DRC1Q96MC2 740 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TSG101Q99816 390 aa22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LIMA1Q9UHB6 759 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1A-205ENST00000534885 EIF3DO15371 548 aaKnown RBP eCLIP22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 DGAT1O75907 488 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FOXR2Q6PJQ5 311 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LRRC55Q6ZSA7 311 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 APBA2Q99767 749 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 EMSYQ7Z589 1322 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TBC1D8O95759 1140 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LACTBP83111 547 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 DUSP28Q4G0W2 176 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CNOT6LQ96LI5 555 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CEP89Q96ST8 783 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 NIFKQ9BYG3 293 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 IKZF4Q9H2S9 585 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TAB2Q9NYJ8 693 aa22.43■■□□□ 1.18
TNFRSF1A-205ENST00000534885 LRRC10BA6NIK2 292 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 NKRFO15226 690 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PSMC4P43686 418 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 NR1I3Q14994 352 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 AFG1LQ8WV93 481 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 EMID1Q96A84 441 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CTAGE1Q96RT6 745 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ATP6V0A4Q9HBG4 840 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ZMYM2Q9UBW7 1377 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 K7ENM7 598 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TEX33O43247 280 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 EEF1GP26641 437 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 POLGP54098 1239 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PEX3P56589 373 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 HTRA3P83110 453 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TARBP2Q15633 366 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PLPPR4Q7Z2D5 763 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TMC6Q7Z403 805 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PPTC7Q8NI37 304 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 STRA6Q9BX79 667 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 VPS16Q9H269 839 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 NRBP2Q9NSY0 501 aa22.42■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PPP1R37O75864 691 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 COPB1P53618 953 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FCGRTP55899 365 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FKBP3Q00688 224 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 EMC2Q15006 297 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 OLFML2BQ68BL8 750 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 IQSEC1Q6DN90 963 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FILIP1Q7Z7B0 1213 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 MCPH1Q8NEM0 835 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ANKRD20A12PQ8NF67 263 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 BSNDQ8WZ55 320 aa22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 DHX33Q9H6R0 707 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 MAGEC2Q9UBF1 373 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1A-205ENST00000534885 GOLGA6L6A8MZA4 724 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TPM3P06753 285 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CAP1Q01518 475 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 CCDC186Q7Z3E2 898 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 KIFAP3Q92845 792 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SMARCAD1Q9H4L7 1026 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TRAF3IP3Q9Y228 551 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PDXKO00764 312 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 IGHA2P01877 340 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ZNF865P0CJ78 1059 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 TNFAIP2Q03169 654 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PLCB4Q15147 1175 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 VSTM4Q8IW00 320 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FAM114A1Q8IWE2 563 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 REM2Q8IYK8 340 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 ATP8B4Q8TF62 1192 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 BBXQ8WY36 941 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 FAM167AQ96KS9 214 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 GABRQQ9UN88 632 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 PCDHB13Q9Y5F0 798 aa22.4■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SLC16A4O15374 487 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms