RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ZBTB42B2RXF5 422 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 ENPP3O14638 875 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 GHRP10912 638 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 ATP4AP20648 1035 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 DNAJB1P25685 340 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF76P36508 570 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 IGBP1P78318 339 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 MRPS6P82932 125 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 MTHFD1LQ6UB35 978 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 TSHZ1Q6ZSZ6 1077 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 FRMD5Q7Z6J6 570 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 CCDC60Q8IWA6 550 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 TRAPPC12Q8WVT3 735 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 TNPO1Q92973 898 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF689Q96CS4 500 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF274Q96GC6 653 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 AGO3Q9H9G7 860 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 NCOA5Q9HCD5 579 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
CLSTN3-203ENST00000534830 MED19A0JLT2 244 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 M0R2N6 131 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 IPO5O00410 1097 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 HBP1O60381 514 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 KRT37O76014 449 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 GLP2RO95838 553 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 ITGB1P05556 798 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 SP100P23497 879 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 CCT2P78371 535 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 RTN4RL1Q86UN2 441 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 REXO1Q8N1G1 1221 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 NME8Q8N427 588 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 RASGRP4Q8TDF6 673 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 LINC01599Q8WXQ3 324 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 SLC26A6Q9BXS9 759 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 TLE6Q9H808 572 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 VPS54Q9P1Q0 977 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 TRPV2Q9Y5S1 764 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 GVINP1Q7Z2Y8 2422 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 MYO10Q9HD67 2058 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
CLSTN3-203ENST00000534830 COL1A2P08123 1366 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 IGSF9BQ9UPX0 1349 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 FNDC1Q4ZHG4 1894 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 DDX39AO00148 427 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 ATF7P17544 494 aaPredicted RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 USP11P51784 963 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 NPY5RQ15761 445 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 IER5Q5VY09 327 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 KLHL23Q8NBE8 558 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 SPPL3Q8TCT6 385 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 ATP8B4Q8TF62 1192 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 POF1BQ8WVV4 589 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 P2RX5Q93086 422 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF577Q9BSK1 485 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 CELF4Q9BZC1 486 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF302Q9NR11 478 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 PCDHGC5Q9Y5F6 944 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 CYP46A1Q9Y6A2 500 aa11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 MRPL42Q9Y6G3 142 aaKnown RBP11.41□□□□□ -0.58
CLSTN3-203ENST00000534830 PER2O15055 1255 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 KLRC1P26715 233 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 CD52P31358 61 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 ZNF484Q5JVG2 852 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 SWSAP1Q6NVH7 229 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 MIS18BP1Q6P0N0 1132 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 FAM43BQ6ZT52 329 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 DGLUCYQ7Z3D6 616 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 KIAA0319LQ8IZA0 1049 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 FAM177A1Q8N128 213 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 KREMEN2Q8NCW0 462 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 SUSD6Q92537 303 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 FAM49AQ9H0Q0 323 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 PADI3Q9ULW8 664 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 PCDHA10Q9Y5I2 948 aa11.4□□□□□ -0.58
CLSTN3-203ENST00000534830 CYP3A7-CYP3A51PA0A087WV96 503 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 MSH4O15457 936 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 DGKIO75912 1065 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 DEXIO95424 95 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 CYP3A7P24462 503 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 KRT76Q01546 638 aa11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-203ENST00000534830 TMEM62Q0P6H9 643 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms