RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 LRRC43Q8N309 656 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 FANCBQ8NB91 859 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 KREMEN2Q8NCW0 462 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 CYP2W1Q8TAV3 490 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 CWH43Q9H720 699 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 CDHR5Q9HBB8 845 aa15.36■□□□□ 0.05
HIF3A-212ENST00000529205 RBM8AQ9Y5S9 174 aaKnown RBP15.36■□□□□ 0.05
HIF3A-212ENST00000529205 IGKV6D-21A0A0A0MT36 114 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 CA8P35219 290 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 FAM189BP81408 668 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 SMC1AQ14683 1233 aaKnown RBP15.35■□□□□ 0.05
HIF3A-212ENST00000529205 KIZQ2M2Z5 673 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 SYCE2Q6PIF2 218 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 ABHD15Q6UXT9 468 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 METTL13Q8N6R0 699 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 TMEM40Q8WWA1 233 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 OSMRQ99650 979 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 ANO3Q9BYT9 981 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
HIF3A-212ENST00000529205 SPG21Q9NZD8 308 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 CEP131Q9UPN4 1083 aa15.35■□□□□ 0.05
HIF3A-212ENST00000529205 HIDE1A8MVS5 230 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 MEIS1O00470 390 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 TMOD1P28289 359 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 MTHFRP42898 656 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 ADCY7P51828 1080 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 ITGB3BPQ13352 177 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-212ENST00000529205 AP3B2Q13367 1082 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 NIPA1Q7RTP0 329 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 FAM228AQ86W67 206 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-212ENST00000529205 BBXQ8WY36 941 aaPredicted RBP15.34■□□□□ 0.05
HIF3A-212ENST00000529205 PPP1R16BQ96T49 567 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 ADAM7Q9H2U9 754 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 MFSD1Q9H3U5 465 aa15.34■□□□□ 0.05
HIF3A-212ENST00000529205 KMT2EQ8IZD2 1858 aa15.33■□□□□ 0.05
HIF3A-212ENST00000529205 MAGEB2O15479 319 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 MICU3Q86XE3 530 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 PLA2G4DQ86XP0 818 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 CCDC60Q8IWA6 550 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-212ENST00000529205 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 MRPL43Q8N983 215 aaKnown RBP15.33■□□□□ 0.04
HIF3A-212ENST00000529205 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 CASD1Q96PB1 797 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 MAP7D2Q96T17 732 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 TBC1D22BQ9NU19 505 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 HCFC2Q9Y5Z7 792 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 WDFY4Q6ZS81 3184 aa15.33■□□□□ 0.04
HIF3A-212ENST00000529205 C5orf42Q9H799 3197 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 PDGFBP01127 241 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-212ENST00000529205 VTNP04004 478 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 SREBF1P36956 1147 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 ALDH7A1P49419 539 aaKnown RBP15.32■□□□□ 0.04
HIF3A-212ENST00000529205 ATAT1Q5SQI0 421 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 WWC2Q6AWC2 1192 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 TRMT1LQ7Z2T5 733 aaKnown RBP15.32■□□□□ 0.04
HIF3A-212ENST00000529205 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
HIF3A-212ENST00000529205 RNF169Q8NCN4 708 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 EXOC6Q8TAG9 804 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
HIF3A-212ENST00000529205 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
HIF3A-212ENST00000529205 FNDC1Q4ZHG4 1894 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 C2CD4DB7Z1M9 353 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 IPO5O00410 1097 aaKnown RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 GPR32O75388 356 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 C22orf31O95567 290 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 BRD1O95696 1058 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 CCNE2O96020 404 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 PSAPP07602 524 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 GIT2Q14161 759 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 DSC3Q14574 896 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 MCTP2Q6DN12 878 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 LRRC55Q6ZSA7 311 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 RSPH1Q8WYR4 309 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 FAM167AQ96KS9 214 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 SCLT1Q96NL6 688 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 ZNF577Q9BSK1 485 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 POMKQ9H5K3 350 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 DZANK1Q9NVP4 752 aa15.31■□□□□ 0.04
HIF3A-212ENST00000529205 DBR1Q9UK59 544 aaKnown RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 MAFBQ9Y5Q3 323 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-212ENST00000529205 C2orf71A6NGG8 1288 aa15.3■□□□□ 0.04
HIF3A-212ENST00000529205 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
HIF3A-212ENST00000529205 CXCL14O95715 111 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms