RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 ELF3P78545 371 aaPredicted RBP19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 U2AF1L4Q8WU68 220 aaKnown RBP19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 NR2E1Q9Y466 385 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 IRS2Q9Y4H2 1338 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 POTEB3A0JP26 581 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 POTECB2RU33 542 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 SHBGP04278 402 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 SLC8A1P32418 973 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 CASP5P51878 434 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 POTEBQ6S5H4 581 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 FRMD5Q7Z6J6 570 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 VPS36Q86VN1 386 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 AMFRQ9UKV5 643 aa19.79■□□□□ 0.76
PCDHB18P-201ENST00000524813 DDX3XO00571 662 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 CHN1P15882 459 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 MRPL12P52815 198 aaKnown RBP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 DCAF17Q5H9S7 520 aaPredicted RBP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 HOOK3Q86VS8 718 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 MIEF2Q96C03 454 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 ZNF317Q96PQ6 595 aaPredicted RBP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 SF3A3Q12874 501 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 PPP1R7Q15435 360 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 RPGRQ92834 1020 aaKnown RBP19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 SELENOSQ9BQE4 189 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 RAB17Q9H0T7 212 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 GOPCQ9HD26 462 aa19.78■□□□□ 0.76
PCDHB18P-201ENST00000524813 ATP6V1G2O95670 118 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 MMEP08473 750 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 XRCC5P13010 732 aaKnown RBP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 GCFC2P16383 781 aaKnown RBP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 ANXA13P27216 316 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 NPEPPSP55786 919 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 EPHA7Q15375 998 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 ARSHQ5FYA8 562 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 SPDYCQ5MJ68 293 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 HIBCHQ6NVY1 386 aaPredicted RBP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 ANKS4BQ8N8V4 417 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 RTFDC1Q9BY42 306 aaPredicted RBP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 EPB41L4BQ9H329 900 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 GPCPD1Q9NPB8 672 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 OSGEPQ9NPF4 335 aa19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 DDX60LQ5H9U9 1706 aaKnown RBP19.77■□□□□ 0.76
PCDHB18P-201ENST00000524813 HMGB2P26583 209 aaKnown RBP19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 BTDP43251 543 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 GALCP54803 685 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 JAM2P57087 298 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 NBPF9Q3BBW0 867 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 GJB7Q6PEY0 223 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 ADAT2Q7Z6V5 191 aaKnown RBP19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 SIX2Q9NPC8 291 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 INTUQ9ULD6 942 aa19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 TTC7AQ9ULT0 858 aaPredicted RBP19.77■□□□□ 0.75
PCDHB18P-201ENST00000524813 ATP8B3O60423 1300 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 FRMD3A2A2Y4 597 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 SPDYE3A6NKU9 549 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 LDHCP07864 332 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 COPB2P35606 906 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 DR1Q01658 176 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 PRPF4BQ13523 1007 aaKnown RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 TCERG1LQ5VWI1 586 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 LRRC47Q8N1G4 583 aaKnown RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 ATP6V0A4Q9HBG4 840 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 NOD2Q9HC29 1040 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 ZDHHC18Q9NUE0 388 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 TRAF3IP3Q9Y228 551 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 ANKRD31Q8N7Z5 1873 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 TLDC2A0PJX2 215 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 BUB1BO60566 1050 aaPredicted RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 CLK2P49760 499 aaKnown RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 PMS2P54278 862 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 PTENP60484 403 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 GRAPQ13588 217 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 DCAF12L1Q5VU92 463 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 DUPD1Q68J44 220 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 TLDC1Q6P9B6 456 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 TEX11Q8IYF3 940 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 GRAPLQ8TC17 118 aaPredicted RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 ATXN2LQ8WWM7 1075 aaKnown RBP19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 BAIAP2L1Q9UHR4 511 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 PPP1R9AQ9ULJ8 1098 aa19.76■□□□□ 0.75
PCDHB18P-201ENST00000524813 DDX3YO15523 660 aaKnown RBP19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 ASAP2O43150 1006 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 GFPT2O94808 682 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 NUDT17P0C025 328 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 MMP13P45452 471 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 NOVP48745 357 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 TBC1D31Q96DN5 1066 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 ERP44Q9BS26 406 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 KIF13BQ9NQT8 1826 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 SMIM23A6NLE4 172 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 AKAP3O75969 853 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 HOXD13P35453 343 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 SLC12A3P55017 1021 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 KNOP1Q1ED39 458 aaKnown RBP19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 ASPRV1Q53RT3 343 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 PIGWQ7Z7B1 504 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 LRRC34Q8IZ02 419 aa19.75■□□□□ 0.75
PCDHB18P-201ENST00000524813 LNX1Q8TBB1 728 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms