RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 POFUT1Q9H488 388 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 RIC8BQ9NVN3 520 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA6AQ9NYA3 693 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 SCOCQ9UIL1 159 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 DENND2AQ9ULE3 1009 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 NUMBLQ9Y6R0 609 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZC3H12DA2A288 527 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 MAFKO60675 156 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRPF6O94906 941 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 U2AF1L5P0DN76 240 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 CCND1P24385 295 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 MC4RP32245 332 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 WASP42768 502 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 YBX1P67809 324 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 U2AF1Q01081 240 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 ALDH6A1Q02252 535 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 MUM1Q2TAK8 710 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 CR1LQ2VPA4 569 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 EFCAB2Q5VUJ9 269 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 LILRA6Q6PI73 481 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 PAQR3Q6TCH7 311 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 MILR1Q7Z6M3 343 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 PNMA8AQ86V59 439 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 SIRT2Q8IXJ6 389 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 PJA1Q8NG27 643 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 COA7Q96BR5 231 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 LIN37Q96GY3 246 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 MAML3Q96JK9 1138 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 FAM84AQ96KN4 292 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 FOXB1Q99853 325 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 GTPBP4Q9BZE4 634 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 HAPLN2Q9GZV7 340 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 WNT8AQ9H1J5 351 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 DNAJC28Q9NX36 388 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 KLHL14Q9P2G3 628 aa4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 YBX2Q9Y2T7 364 aaKnown RBP4.52□□□□□ -1.69
HMGN1P28-201ENST00000521340 LRRC10BA6NIK2 292 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 APAF1O14727 1248 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 ERC2O15083 957 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 NDUFS2O75306 463 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 HRGP04196 525 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 KRT18P05783 430 aaKnown RBP4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 LPLP06858 475 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 OSMP13725 252 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 VCAM1P19320 739 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 ZNF267Q14586 743 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 MLANAQ16655 118 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 CD276Q5ZPR3 534 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 BICRALQ6AI39 1079 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 TEPPQ6URK8 271 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 RPTNQ6XPR3 784 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 ESPNLQ6ZVH7 1005 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 PHYKPLQ8IUZ5 450 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 FAM126BQ8IXS8 530 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 PITHD1Q9GZP4 211 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRDM11Q9NQV5 511 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 RBPJLQ9UBG7 517 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 EDARQ9UNE0 448 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 IPPQ9Y573 584 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 NUB1Q9Y5A7 615 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 MRFAP1Q9Y605 127 aa4.51□□□□□ -1.69
HMGN1P28-201ENST00000521340 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 IRS2Q9Y4H2 1338 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 ANO9A1A5B4 782 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRAMEF22A3QJZ6 481 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 ZNF839A8K0R7 811 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 XPOTO43592 962 aaKnown RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 AP1G1O43747 822 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 MAFO75444 373 aaPredicted RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC5A1P13866 664 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 SDHBP21912 280 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 RGS3P49796 1198 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRR5P85299 388 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 BIRC2Q13490 618 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 STILQ15468 1287 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PKN1Q16512 942 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 KCNMB1Q16558 191 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 UGT8Q16880 541 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PRAMEF18Q5VWM3 479 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 KIAA1841Q6NSI8 718 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 CCDC62Q6P9F0 684 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 LRSAM1Q6UWE0 723 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 LIPIQ6XZB0 460 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 OVCH2Q7RTZ1 564 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 CATIPQ7Z7H3 387 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 BCL6BQ8N143 479 aaPredicted RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PPP1R14CQ8TAE6 165 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 DIS3LQ8TF46 1054 aaKnown RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 MYLIPQ8WY64 445 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 PEX11GQ96HA9 241 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 CCDC120Q96HB5 630 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 CCDC136Q96JN2 1154 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLC38A3Q99624 504 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 ACO2Q99798 780 aaKnown RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 RNF32Q9H0A6 362 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 QRSL1Q9H0R6 528 aaKnown RBP4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 KCTD10Q9H3F6 313 aa4.5□□□□□ -1.69
HMGN1P28-201ENST00000521340 BCAS3Q9H6U6 928 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms