RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.54
PCDHGA1-202ENST00000517417 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 SYNJ2BP-COX16A0A087WUM0 186 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 PVALEFA0A1B0GWK0 134 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 GRID2IPA4D2P6 1211 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 hCG_1984214I3L0E3 225 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 WNT7AO00755 349 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 SEC24CP53992 1094 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 IFRD2Q12894 506 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 GUF1Q8N442 669 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF713Q8N859 430 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC197Q8NCU1 140 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM114A2Q9NRY5 505 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 COX16Q9P0S2 106 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 BZW2Q9Y6E2 419 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 H0YCG3 227 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 CLTAP09496 248 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 GAP43P17677 238 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF131P52739 623 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 ACTN3Q08043 901 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 Q3C1V9 767 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 CEP128Q6ZU80 1094 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAIP1Q8WWC4 291 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 PLAGL2Q9UPG8 496 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 FRMD3A2A2Y4 597 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 GMNCA6NCL1 334 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 E9PMD0 336 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZBTB5O15062 677 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 SLC8A1P32418 973 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 MFAP3P55082 362 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 AENQ8WTP8 325 aaKnown RBP11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 HESX1Q9UBX0 185 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
PCDHGA1-202ENST00000517417 STX2P32856 288 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 TFAMQ00059 246 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 FYB2Q5VWT5 728 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 PALM2Q8IXS6 379 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 RAD54LQ92698 747 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF653Q96CK0 615 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 DDX47Q9H0S4 455 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 CAPN9O14815 690 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 RNF8O76064 485 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAN1A1P33908 653 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 IFNAR2P48551 515 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 CIAPIN1Q6FI81 312 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 WDR59Q6PJI9 974 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC117Q8IWD4 279 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ZNF34Q8IZ26 560 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 RPSAP08865 295 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 LMNB1P20700 586 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 KRT81Q14533 505 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ACCSQ96QU6 501 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 PARP2Q9UGN5 583 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 AFDNP55196 1824 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 STAM2O75886 525 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ASNSP08243 561 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 MXI1P50539 228 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 GPSM2P81274 684 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 KLC4Q9NSK0 619 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 KBTBD4Q9NVX7 518 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
PCDHGA1-202ENST00000517417 CCDC160A6NGH7 325 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 GOLGA8SH3BPF8 625 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 THAP12O43422 761 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 MAGOHP61326 146 aaKnown RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 COASYQ13057 564 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 SNX1Q13596 522 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 MEA1Q16626 185 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PODNQ7Z5L7 613 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PROM2Q8N271 834 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 OR2W6PQ8NHA6 318 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 F5H6K3 240 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PLTPP55058 493 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 PEX3P56589 373 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 KLRC3Q07444 240 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 BFSP1Q12934 665 aa11.68□□□□□ -0.54
PCDHGA1-202ENST00000517417 SUPT20HL1Q3ZLR7 823 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms