RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 HNRNPDLO14979 420 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SPAG7O75391 227 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 FTLP02792 175 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 GCLMP48507 274 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 BYSLQ13895 437 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 LRIG3Q6UXM1 1119 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 KDM7AQ6ZMT4 941 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ZNF713Q8N859 430 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 C1orf54Q8WWF1 131 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 C7orf25Q9BPX7 421 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ANAPC7Q9UJX3 599 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 PCDHB4Q9Y5E5 795 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 PTPRUQ92729 1446 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 A0A087X0B3 334 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 PIK3CAP42336 1068 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 SPARCL1Q14515 664 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 CELF1Q92879 486 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 CNTNAP5Q8WYK1 1306 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 STAM2O75886 525 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 GDF11O95390 407 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 KRT1P04264 644 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 ARMC2Q8NEN0 867 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 PPP4R1Q8TF05 950 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 PLAGL2Q9UPG8 496 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 PLEKHG2Q9H7P9 1386 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 MIF4GDA9UHW6 222 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 MT-ND3P03897 115 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 GLI1P08151 1106 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 SLC9A1P19634 815 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 SARSP49591 514 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 GPC5P78333 572 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 LMNB2Q03252 620 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 DMP1Q13316 513 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 NAB2Q15742 525 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 LONRF1Q17RB8 773 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 GEN1Q17RS7 908 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 EARS2Q5JPH6 523 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 ATP2A3Q93084 1043 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 EDEM3Q9BZQ6 932 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 NDC80O14777 642 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 ALAS1P13196 640 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 BASP1P80723 227 aaKnown RBP8.34□□□□□ -1.07
CLCN3-209ENST00000513761 BIRC2Q13490 618 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 RFX8Q6ZV50 586 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 RFFLQ8WZ73 363 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 ERGIC2Q96RQ1 377 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 TMEM94Q12767 1356 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 TSPOAP1O95153 1857 aa8.34□□□□□ -1.07
CLCN3-209ENST00000513761 USP32Q8NFA0 1604 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 A0A1W2PQJ5 194 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 GOLGA8SH3BPF8 625 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 GOLGA8MH3BSY2 632 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 GYG2O15488 501 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 ORC4O43929 436 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 PFDN1O60925 122 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 DCTN3O75935 186 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 CHRNA3P32297 505 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 GALCP54803 685 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 RNASELQ05823 741 aaKnown RBP8.34□□□□□ -1.08
CLCN3-209ENST00000513761 PDE1CQ14123 709 aaPredicted RBP8.34□□□□□ -1.08
CLCN3-209ENST00000513761 SEPT6Q14141 434 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 KIAA1755Q5JYT7 1200 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 HIPK4Q8NE63 616 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 ANKS1AQ92625 1134 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 SGSM3Q96HU1 749 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 NUDCD1Q96RS6 583 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 ISCUQ9H1K1 167 aa8.34□□□□□ -1.08
CLCN3-209ENST00000513761 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 ABL1P00519 1130 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
CLCN3-209ENST00000513761 HADHQ16836 314 aaKnown RBP8.33□□□□□ -1.08
CLCN3-209ENST00000513761 TRPM8Q7Z2W7 1104 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 NLRX1Q86UT6 975 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 ACCSQ96QU6 501 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-209ENST00000513761 CNOT8Q9UFF9 292 aaKnown RBP8.33□□□□□ -1.08
CLCN3-209ENST00000513761 FRMPD1Q5SYB0 1578 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 CCT8L1PA6NM43 557 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 USP17L10C9JJH3 530 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 H7C0C1 242 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 CSF1RP07333 972 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 UCHL3P15374 230 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 ATP2B4P23634 1241 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 ATP5OP48047 213 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 NXNQ6DKJ4 435 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 TMED8Q6PL24 325 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-209ENST00000513761 SPATA21Q7Z572 469 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 SUPT20HQ8NEM7 779 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 SLC35G2Q8TBE7 412 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 ZFP69BQ9UJL9 534 aa8.33□□□□□ -1.08
CLCN3-209ENST00000513761 CASQ2O14958 399 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms