RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 PTPN5P54829 565 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 SIGLEC14Q08ET2 396 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 KIZQ2M2Z5 673 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
TCOF1-212ENST00000513538 PLPP4Q5VZY2 271 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 PPP1R18Q6NYC8 613 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 TMEM184AQ6ZMB5 413 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 THNSL1Q8IYQ7 743 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 ZNF302Q9NR11 478 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 C1orf112Q9NSG2 853 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-212ENST00000513538 TMEM161AQ9NX61 479 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 PTPN21Q16825 1174 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 SWSAP1Q6NVH7 229 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 ANKRD54Q6NXT1 300 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 LLGL2Q6P1M3 1020 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 PDXDC2PQ6P474 469 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 SUGP1Q8IWZ8 645 aaKnown RBP10.97□□□□□ -0.65
TCOF1-212ENST00000513538 LINC01465Q8N7H1 131 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 FEZF2Q8TBJ5 459 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 MRPS27Q92552 414 aaKnown RBP10.97□□□□□ -0.65
TCOF1-212ENST00000513538 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
TCOF1-212ENST00000513538 CASD1Q96PB1 797 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 CDCA3Q99618 268 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-212ENST00000513538 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-212ENST00000513538 DENND4AQ7Z401 1863 aa10.97□□□□□ -0.65
TCOF1-212ENST00000513538 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 LAG3P18627 525 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 CDC27P30260 824 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 TECP42680 631 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 CLCN3P51790 818 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 CRYBB1P53674 252 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 PLCB3Q01970 1234 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 AP3B2Q13367 1082 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 RTN1Q16799 776 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 ZNF484Q5JVG2 852 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 CLLU1OSQ5K130 101 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 JAKMIP3Q5VZ66 844 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 FAM160B1Q5W0V3 765 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 NIPA1Q7RTP0 329 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 PLA2G4DQ86XP0 818 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 RASGRP4Q8TDF6 673 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 ZNF668Q96K58 619 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 TCF25Q9BQ70 676 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 TMEM117Q9H0C3 514 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 SMOC2Q9H3U7 446 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 ELAC1Q9H777 363 aaKnown RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 BARHL2Q9NY43 387 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 LZTS1Q9Y250 596 aa10.96□□□□□ -0.65
TCOF1-212ENST00000513538 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
TCOF1-212ENST00000513538 IPO5O00410 1097 aaKnown RBP10.95□□□□□ -0.66
TCOF1-212ENST00000513538 GPR182O15218 404 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 EDIL3O43854 480 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 CYP3A4P08684 503 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 AVPR2P30518 371 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF76P36508 570 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-212ENST00000513538 PKN1Q16512 942 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 ADCK5Q3MIX3 580 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
TCOF1-212ENST00000513538 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 KCNT2Q6UVM3 1135 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 LRRC71Q8N4P6 559 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 METTL13Q8N6R0 699 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 LENG9Q96B70 501 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 SNX27Q96L92 541 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 ADAMTS10Q9H324 1103 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 ENTPD7Q9NQZ7 604 aa10.95□□□□□ -0.66
TCOF1-212ENST00000513538 RBM28Q9NW13 759 aaKnown RBP10.95□□□□□ -0.66
TCOF1-212ENST00000513538 GOLGA8AA7E2F4 631 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 C2CD4DB7Z1M9 353 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 ZBTB43O43298 467 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF862O60290 1169 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 NLRP11P59045 1033 aaKnown RBP10.94□□□□□ -0.66
TCOF1-212ENST00000513538 TMEM173Q86WV6 379 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-212ENST00000513538 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 TEX2Q8IWB9 1127 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-212ENST00000513538 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-212ENST00000513538 RIPOR3Q96MK2 946 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 PRRX2Q99811 253 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 ZNF577Q9BSK1 485 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 POMKQ9H5K3 350 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 GABBR1Q9UBS5 961 aa10.94□□□□□ -0.66
TCOF1-212ENST00000513538 C2orf16Q68DN1 1984 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms