RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 ABHD15Q6UXT9 468 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 CCDC83Q8IWF9 413 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 SUGCTQ9HAC7 445 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 COL1A2P08123 1366 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 ARID2Q68CP9 1835 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 SMIM35A0A1B0GVV1 85 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 GHRP10912 638 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 PDCP20941 246 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 CIITAP33076 1130 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 IGBP1P78318 339 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 AAK1Q2M2I8 961 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 L1TD1Q5T7N2 865 aaKnown RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 KRT40Q6A162 431 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 TSHZ1Q6ZSZ6 1077 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 CCDC60Q8IWA6 550 aaPredicted RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 SLC26A6Q9BXS9 759 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 TBC1D22BQ9NU19 505 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 LMBRD1Q9NUN5 540 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 COG5Q9UP83 839 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 ATP6V1DQ9Y5K8 247 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 CDY2AQ9Y6F7 541 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 KDM3AQ9Y4C1 1321 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 STX6O43752 255 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 HBP1O60381 514 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 IER5Q5VY09 327 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 MIS18BP1Q6P0N0 1132 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 LAPTM4BQ86VI4 370 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 NME8Q8N427 588 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 YME1L1Q96TA2 773 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 C17orf80Q9BSJ5 609 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 ZNF577Q9BSK1 485 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
CCL28-203ENST00000513525 MTUS1Q9ULD2 1270 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 TRPV2Q9Y5S1 764 aa11.13□□□□□ -0.63
CCL28-203ENST00000513525 M0QZ92 97 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 DDX39AO00148 427 aaKnown RBP11.12□□□□□ -0.63
CCL28-203ENST00000513525 UPP2O95045 317 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 SYT1P21579 422 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 GJB2P29033 226 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 KRT76Q01546 638 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
CCL28-203ENST00000513525 MTHFD1LQ6UB35 978 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 TRAPPC12Q8WVT3 735 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 LENG9Q96B70 501 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 LLPHQ9BRT6 129 aaKnown RBP11.12□□□□□ -0.63
CCL28-203ENST00000513525 FTHL17Q9BXU8 183 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 ZNF302Q9NR11 478 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 VPS54Q9P1Q0 977 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
CCL28-203ENST00000513525 IGSF9BQ9UPX0 1349 aa11.12□□□□□ -0.63
CCL28-203ENST00000513525 FSD2A1L4K1 749 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 TNFRSF10AO00220 468 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ENPP3O14638 875 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 BACH1O14867 736 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 EDIL3O43854 480 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 DEXIO95424 95 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 MBD3O95983 291 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 BMP1P13497 986 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 USP11P51784 963 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 TFF2Q03403 129 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 KCNC4Q03721 635 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 EPC2Q52LR7 807 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 PRR16Q569H4 304 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ZNF484Q5JVG2 852 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ADAMTS19Q8TE59 1207 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ZNF689Q96CS4 500 aaPredicted RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 ZBTB10Q96DT7 871 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 CELF4Q9BZC1 486 aaKnown RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 AGO3Q9H9G7 860 aaKnown RBP11.11□□□□□ -0.63
CCL28-203ENST00000513525 TCEAL9Q9UHQ7 104 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ADGRA3Q8IWK6 1321 aa11.11□□□□□ -0.63
CCL28-203ENST00000513525 ZBTB42B2RXF5 422 aa11.1□□□□□ -0.63
CCL28-203ENST00000513525 H3BNC9 293 aa11.1□□□□□ -0.63
CCL28-203ENST00000513525 PFKFB2O60825 505 aa11.1□□□□□ -0.63
CCL28-203ENST00000513525 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
CCL28-203ENST00000513525 ATP4AP20648 1035 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms