RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 GPR62Q9BZJ7 368 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 UPF2Q9HAU5 1272 aaKnown RBP6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 HYPKQ9NX55 129 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 GFOD1Q9NXC2 390 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 PIM2Q9P1W9 311 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 PLAGL2Q9UPG8 496 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 NIP7Q9Y221 180 aaKnown RBP eCLIP6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 LEMD3Q9Y2U8 911 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 ST14Q9Y5Y6 855 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 MRPL42Q9Y6G3 142 aaKnown RBP6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 IKBKGQ9Y6K9 419 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 ZNF521Q96K83 1311 aa6.17□□□□□ -1.42
TBC1D1-217ENST00000511238 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 FAM155AB1AL88 458 aaPredicted RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 KINO60870 393 aaKnown RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 CEACAM5P06731 702 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 FURINP09958 794 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SRFP11831 508 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 RPL17P18621 184 aaKnown RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 ITIH2P19823 946 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 KCNA3P22001 575 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 CHRNA5P30532 468 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 RBM5P52756 815 aaKnown RBP eCLIP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 ST5P78524 1137 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 AIMP1Q12904 312 aaKnown RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 PTPROQ16827 1216 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 TWISTNBQ3B726 338 aaPredicted RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 NOL9Q5SY16 702 aaKnown RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 CCDC30Q5VVM6 783 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 CC2D1AQ6P1N0 951 aaPredicted RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 ZNF34Q8IZ26 560 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 TSPYL6Q8N831 410 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 MIGA1Q8NAN2 632 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 LRRN4CLQ8ND94 238 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SYTL5Q8TDW5 730 aaPredicted RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SH3TC2Q8TF17 1288 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 RCC1LQ96I51 464 aaKnown RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 GPATCH3Q96I76 525 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 CDK5RAP3Q96JB5 506 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 MPP4Q96JB8 637 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 DUSP15Q9H1R2 295 aaPredicted RBP6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 KANSL2Q9H9L4 492 aa6.16□□□□□ -1.42
TBC1D1-217ENST00000511238 A0A1W2PQU0 124 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 FSD2A1L4K1 749 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 IQCA1LA6NCM1 817 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 H0YIN7 160 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 AGRPO00253 132 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 CDKL5O76039 1030 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PRAMEF1O95521 474 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 IGHDP01880 384 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ITGAVP06756 1048 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 CD53P19397 219 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 GPTP24298 496 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 STIP1P31948 543 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PDE6BP35913 854 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 MRE11P49959 708 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 RWDD2BP57060 319 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ADCY2Q08462 1091 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 CCDC15Q0P6D6 951 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PPP2R5AQ15172 486 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 MAP9Q49MG5 647 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PARP10Q53GL7 1025 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 C2orf27AQ580R0 203 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 DALRD3Q5D0E6 543 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PRSS36Q5K4E3 855 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 CDKAL1Q5VV42 579 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 SUSD4Q5VX71 490 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 TRIM74Q86UV6 250 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 TRIM73Q86UV7 250 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 C2CD5Q86YS7 1000 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 MYOCDQ8IZQ8 938 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ARHGEF39Q8N4T4 335 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 FIBCD1Q8N539 461 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 BVESQ8NE79 360 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ADCY4Q8NFM4 1077 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 THAP3Q8WTV1 239 aaPredicted RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 PPP1R14AQ96A00 147 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ZBTB9Q96C00 473 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 RPS6KC1Q96S38 1066 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 LGR4Q9BXB1 951 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 STK31Q9BXU1 1019 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 NYXQ9GZU5 481 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ASCC2Q9H1I8 757 aaPredicted RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 NOL6Q9H6R4 1146 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 CHST7Q9NS84 486 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 IRAK4Q9NWZ3 460 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 ZC3H7BQ9UGR2 993 aaKnown RBP6.15□□□□□ -1.42
TBC1D1-217ENST00000511238 RSPH14Q9UHP6 348 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms