RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 NEK9Q8TD19 979 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 PABPC5Q96DU9 382 aaKnown RBP23.5■■□□□ 1.35
CLDND1-216ENST00000507944 ALG13Q9NP73 1137 aaKnown RBP23.5■■□□□ 1.35
CLDND1-216ENST00000507944 RGS18Q9NS28 235 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 C1orf112Q9NSG2 853 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 PLAGL2Q9UPG8 496 aa23.5■■□□□ 1.35
CLDND1-216ENST00000507944 TMOD1P28289 359 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 PRKCEQ02156 737 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 SCRN1Q12765 414 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 NONOQ15233 471 aaKnown RBP eCLIP23.49■■□□□ 1.35
CLDND1-216ENST00000507944 UGCGQ16739 394 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 NAALADL2Q58DX5 795 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 SLC24A5Q71RS6 500 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 FAM228AQ86W67 206 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 LINC01465Q8N7H1 131 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 P2RX5Q93086 422 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 MAP7D2Q96T17 732 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 SLKQ9H2G2 1235 aaPredicted RBP23.49■■□□□ 1.35
CLDND1-216ENST00000507944 RNF216Q9NWF9 866 aaPredicted RBP23.49■■□□□ 1.35
CLDND1-216ENST00000507944 AKT3Q9Y243 479 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 ATG2AQ2TAZ0 1938 aa23.49■■□□□ 1.35
CLDND1-216ENST00000507944 C9IYK1 514 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 H3BQ06 376 aaPredicted RBP23.48■■□□□ 1.35
CLDND1-216ENST00000507944 NCK2O43639 380 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 CDKL5O76039 1030 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 NLRP11P59045 1033 aaKnown RBP23.48■■□□□ 1.35
CLDND1-216ENST00000507944 COL19A1Q14993 1142 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 PTCRAQ6ISU1 281 aaPredicted RBP23.48■■□□□ 1.35
CLDND1-216ENST00000507944 MOXD1Q6UVY6 613 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 MIER3Q7Z3K6 550 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 LRRC71Q8N4P6 559 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 RDM1Q8NG50 284 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 MBOAT7Q96N66 472 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 KCNJ14Q9UNX9 436 aa23.48■■□□□ 1.35
CLDND1-216ENST00000507944 KIAA1671Q9BY89 1806 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 MMP1P03956 469 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 INF2Q27J81 1249 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 PUS10Q3MIT2 529 aaKnown RBP23.47■■□□□ 1.35
CLDND1-216ENST00000507944 KRT25Q7Z3Z0 450 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 ZNF710Q8N1W2 664 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 ADAMTS10Q9H324 1103 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 CLDND1Q9NY35 253 aa23.47■■□□□ 1.35
CLDND1-216ENST00000507944 FNDC1Q4ZHG4 1894 aaPredicted RBP23.47■■□□□ 1.35
CLDND1-216ENST00000507944 GRXCR2A6NFK2 248 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 PFKFB2O60825 505 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 ITGB1P05556 798 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 IL9P15248 144 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 CAMK1Q14012 370 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 B3GNT9Q6UX72 402 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 FAM178BQ8IXR5 827 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 KLHL23Q8NBE8 558 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 ETNPPLQ8TBG4 499 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 SPPL3Q8TCT6 385 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 PHF20Q9BVI0 1012 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 C1QTNF1Q9BXJ1 281 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 DDX25Q9UHL0 483 aaKnown RBP23.46■■□□□ 1.35
CLDND1-216ENST00000507944 TPCN1Q9ULQ1 816 aa23.46■■□□□ 1.35
CLDND1-216ENST00000507944 CSPG5O95196 566 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 XBP1P17861 261 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 ANAPC15P60006 121 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 FAM189BP81408 668 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 TBC1D8BQ0IIM8 1120 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 HYAL1Q12794 435 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 DSC3Q14574 896 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 TARBP2Q15633 366 aaKnown RBP23.45■■□□□ 1.34
CLDND1-216ENST00000507944 FAM102BQ5T8I3 360 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 EPHX3Q9H6B9 360 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 CD320Q9NPF0 282 aa23.45■■□□□ 1.34
CLDND1-216ENST00000507944 STK36Q9NRP7 1315 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 TBKBP1A7MCY6 615 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 COL9A1P20849 921 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 EIF4BP23588 611 aaKnown RBP23.44■■□□□ 1.34
CLDND1-216ENST00000507944 DNAJB1P25685 340 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 LETM2Q2VYF4 491 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 XKR3Q5GH77 459 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 SPOUT1Q5T280 376 aaKnown RBP23.44■■□□□ 1.34
CLDND1-216ENST00000507944 ZNF668Q96K58 619 aaPredicted RBP23.44■■□□□ 1.34
CLDND1-216ENST00000507944 NIFKQ9BYG3 293 aaKnown RBP23.44■■□□□ 1.34
CLDND1-216ENST00000507944 ELAC1Q9H777 363 aaKnown RBP23.44■■□□□ 1.34
CLDND1-216ENST00000507944 ATP6V0A4Q9HBG4 840 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 TMEM161AQ9NX61 479 aa23.44■■□□□ 1.34
CLDND1-216ENST00000507944 CCDC194A0A1B0GVG4 234 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 DTNBO60941 627 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 STBD1O95210 358 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 ZSCAN20P17040 1043 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-216ENST00000507944 LTBRP36941 435 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 GPC3P51654 580 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 ANKRD1Q15327 319 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 CTC1Q2NKJ3 1217 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 ERICH6BQ5W0A0 696 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 POF1BQ8WVV4 589 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 IGFLR1Q9H665 355 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 SEPT9Q9UHD8 586 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-216ENST00000507944 PCDHB12Q9Y5F1 795 aa23.43■■□□□ 1.34
CLDND1-216ENST00000507944 SLC37A4O43826 429 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 AK2P54819 239 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 MTERF2Q49AM1 385 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 GJD3Q8N144 294 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 SCLT1Q96NL6 688 aa23.42■■□□□ 1.34
CLDND1-216ENST00000507944 AAASQ9NRG9 546 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms