RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 NECAB2Q7Z6G3 386 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 LRRC56Q8IYG6 542 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 NUDT10Q8NFP7 164 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 NUDT11Q96G61 164 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 AHCYL2Q96HN2 611 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 TOX2Q96NM4 488 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 CCDC8Q9H0W5 538 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 USP36Q9P275 1121 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 KCNG1Q9UIX4 513 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 ADAMTS20P59510 1910 aa5.56□□□□□ -1.52
TOPBP1-204ENST00000505804 PRSS38A1L453 326 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 GOLGA8AA7E2F4 631 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 GOLGA8BA8MQT2 603 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 CYP1A1P04798 512 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 CLEC2LP0C7M8 214 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 KANSL1Q7Z3B3 1105 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 CXorf67Q86X51 503 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 C1QL4Q86Z23 238 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 TXNDC5Q8NBS9 432 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 C14orf119Q9NWQ9 140 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 FTSJ1Q9UET6 329 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 MAGEL2Q9UJ55 1249 aa5.55□□□□□ -1.52
TOPBP1-204ENST00000505804 SLURP1P55000 103 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 BRDTQ58F21 947 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 CT83Q5H943 113 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 ZBTB41Q5SVQ8 909 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 GRAMD4Q6IC98 578 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 OTOP2Q7RTS6 562 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 ZNF761Q86XN6 746 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 ANKRD13AQ8IZ07 590 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 STAG1Q8WVM7 1258 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 LMBR1Q8WVP7 490 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 RPGRQ92834 1020 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 YTHDC1Q96MU7 727 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 TMEM168Q9H0V1 697 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 DDX56Q9NY93 547 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
TOPBP1-204ENST00000505804 MYPNQ86TC9 1320 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 A0A0G2JNJ9 132 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 PCDH8O95206 1070 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 POLD1P28340 1107 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 KCNQ1P51787 676 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 MANFP55145 182 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 BCAR1P56945 870 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 ANTXR2P58335 489 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 ERVK-21P61565 698 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 NFATC3Q12968 1075 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 CCDC62Q6P9F0 684 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 FERMT3Q86UX7 667 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 ZSCAN18Q8TBC5 510 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 TGFBRAP1Q8WUH2 860 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 EAF2Q96CJ1 260 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 MTG2Q9H4K7 406 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 PRDM12Q9H4Q4 367 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 Q9UFV3 132 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 TRHDEQ9UKU6 1024 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 PPP2R3BQ9Y5P8 575 aa5.53□□□□□ -1.52
TOPBP1-204ENST00000505804 KCNC1P48547 511 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 TMEM200BQ69YZ2 307 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 Q6ZUG5 572 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 BCL6BQ8N143 479 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 KCMF1Q9P0J7 381 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 FBXO10Q9UK96 956 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 TMPRSS11EQ9UL52 423 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 DENND2AQ9ULE3 1009 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 USP18Q9UMW8 372 aa5.52□□□□□ -1.53
TOPBP1-204ENST00000505804 A0A0A6YYJ9 748 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 ST20-MTHFSA0A0A6YYL1 179 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 K7ESF4 209 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 GABRDO14764 452 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 OPHN1O60890 802 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 LPLP06858 475 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 PFKMP08237 780 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 ZSCAN22P10073 491 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 GPR3P46089 330 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 STAT5BP51692 787 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 MAP3K12Q12852 859 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 KLF1Q13351 362 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 EIF4HQ15056 248 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 FSCN1Q16658 493 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 DGKDQ16760 1214 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 UGT8Q16880 541 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 PITRM1Q5JRX3 1037 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 FAM26FQ5R3K3 315 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 SYDE2Q5VT97 1194 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 LYSMD2Q8IV50 215 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 CBARPQ8N350 705 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 SYT8Q8NBV8 401 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 LCORQ96JN0 433 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 ACAP3Q96P50 834 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms