RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TNNI3KQ59H18 835 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 C6orf15Q6UXA7 325 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 LBX2Q6XYB7 198 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 Q8N9P0 234 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 SUPT20HQ8NEM7 779 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 DCAF4Q8WV16 495 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 C16orf92Q96LL3 132 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 PHF20Q9BVI0 1012 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 TGIF2Q9GZN2 237 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 PPARGC1AQ9UBK2 798 aaKnown RBP3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 CDC42EP3Q9UKI2 254 aa3.42□□□□□ -1.86
HMGB3P17-201ENST00000504195 SUSD5O60279 629 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 MSCO60682 206 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 CAPNS1P04632 268 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 PTPN1P18031 435 aaKnown RBP3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 USP14P54578 494 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 ELLP55199 621 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 HERVK_113P62684 666 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 LARP1BQ659C4 914 aaKnown RBP3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 MFSD5Q6N075 450 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 HTR3DQ70Z44 454 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 VPS37DQ86XT2 251 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 FAM178BQ8IXR5 827 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 KCNJ15Q99712 375 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 EPN3Q9H201 632 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 ACBD3Q9H3P7 528 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 ACTR10Q9NZ32 417 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 TRPS1Q9UHF7 1281 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 HS3ST4Q9Y661 456 aa3.41□□□□□ -1.86
HMGB3P17-201ENST00000504195 SMAD7O15105 426 aaKnown RBP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 MFAP3LO75121 409 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 DDAH1O94760 285 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 SSBP05455 408 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 ECE1P42892 770 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 ELAVL1Q15717 326 aaKnown RBP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 NBPF6Q5VWK0 638 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 GRAMD4Q6IC98 578 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 FAM111BQ6SJ93 734 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 EP400NLQ6ZTU2 488 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 USP53Q70EK8 1073 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 DPH6Q7L8W6 267 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 BOLLQ8N9W6 283 aaKnown RBP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 MRRFQ96E11 262 aaKnown RBP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 NBPF4Q96M43 638 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 SLC6A15Q9H2J7 730 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 CAPN10Q9HC96 672 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 RIC8BQ9NVN3 520 aa3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 CTDP1Q9Y5B0 961 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P17-201ENST00000504195 DNAJC9-AS1A6NH13 148 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 H2AFYO75367 372 aaKnown RBP3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 MAFO75444 373 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 SOD2P04179 222 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 ATF4P18848 351 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 AOAHP28039 575 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 ABCG1P45844 678 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 ZNF81P51508 661 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 CD83Q01151 205 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 MAP3K12Q12852 859 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 MOGSQ13724 837 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 FXNQ16595 210 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 TIGD2Q4W5G0 525 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 PLEKHG4Q58EX7 1191 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 KANK2Q63ZY3 851 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 IFNL3Q8IZI9 196 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 MNTQ99583 582 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 OR10A5Q9H207 317 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 SRPK3Q9UPE1 567 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 MRVI1Q9Y6F6 885 aa3.39□□□□□ -1.87
HMGB3P17-201ENST00000504195 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 KLRG2A4D1S0 409 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 RECQL4O94761 1208 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 IPO13O94829 963 aaKnown RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 AVPR1BP47901 424 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 ADCY7P51828 1080 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 RABGGTBP53611 331 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 GPR85P60893 370 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 GPR19Q15760 415 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 NAIF1Q69YI7 327 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 KLHDC10Q6PID8 442 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 EEPD1Q7L9B9 569 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 SLC7A6OSQ96CW6 309 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 ALG1Q9BT22 464 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 CD244Q9BZW8 370 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 PRDM13Q9H4Q3 707 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 PRKAG3Q9UGI9 489 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 ATP23Q9Y6H3 246 aa3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 COL11A2P13942 1736 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 SETD1BQ9UPS6 1966 aaKnown RBP3.38□□□□□ -1.87
HMGB3P17-201ENST00000504195 FAM90A27PA6NNH2 459 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 CYSRT1A8MQ03 144 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 B2RBV5 119 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 ST5P78524 1137 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 GNL2Q13823 731 aaKnown RBP3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 SAFB2Q14151 953 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 GAGE13Q4V321 117 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 KLHL22Q53GT1 634 aa3.37□□□□□ -1.87
HMGB3P17-201ENST00000504195 FIGNQ5HY92 759 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms