RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PDE8AO60658 829 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 EFEMP1Q12805 493 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 NOLC1Q14978 699 aaKnown RBP eCLIP8.17□□□□□ -1.1
SF3B1-212ENST00000496458 SART3Q15020 963 aaKnown RBP8.17□□□□□ -1.1
SF3B1-212ENST00000496458 PCOLCEQ15113 449 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 ZNF827Q17R98 1081 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 TAF7LQ5H9L4 462 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 FILIP1Q7Z7B0 1213 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 NME9Q86XW9 330 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 RTKN2Q8IZC4 609 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 EFHBQ8N7U6 833 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 GPR101Q96P66 508 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-212ENST00000496458 LMF1Q96S06 567 aa8.17□□□□□ -1.1
SF3B1-212ENST00000496458 A0A087X0B3 334 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 GPR42O15529 346 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 MEOX1P50221 254 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 SCNN1BP51168 640 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 KPNA1P52294 538 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-212ENST00000496458 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-212ENST00000496458 SMC1BQ8NDV3 1235 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 OR2W6PQ8NHA6 318 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 LEO1Q8WVC0 666 aaPredicted RBP8.16□□□□□ -1.1
SF3B1-212ENST00000496458 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
SF3B1-212ENST00000496458 SEC61A2Q9H9S3 476 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 SMPD4Q9NXE4 827 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 MAGEL2Q9UJ55 1249 aa8.16□□□□□ -1.1
SF3B1-212ENST00000496458 IGSF3O75054 1194 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-212ENST00000496458 HSD3B2P26439 372 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 MRE11P49959 708 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 RAC3P60763 192 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 MYBPC3Q14896 1274 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 TBR1Q16650 682 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 SPATS1Q496A3 300 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 AGBL4Q5VU57 503 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 TRIM68Q6AZZ1 485 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 C7orf31Q8N865 590 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 NEIL1Q96FI4 390 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-212ENST00000496458 SAMD11Q96NU1 681 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 GNRHR2Q96P88 292 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 ZMAT4Q9H898 229 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 FAM184BQ9ULE4 1060 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 NR2E1Q9Y466 385 aa8.15□□□□□ -1.1
SF3B1-212ENST00000496458 IL2P60568 153 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 ADCY1Q08828 1119 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 PHYKPLQ8IUZ5 450 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 PASD1Q8IV76 773 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 ZZZ3Q8IYH5 903 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-212ENST00000496458 OR5AN1Q8NGI8 311 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-212ENST00000496458 POFUT1Q9H488 388 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 ST6GALNAC2Q9UJ37 374 aa8.14□□□□□ -1.11
SF3B1-212ENST00000496458 ARHGAP6O43182 974 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 TGM5O43548 720 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 APOL3O95236 402 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 USP30Q70CQ3 517 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 CHST13Q8NET6 341 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 C8orf49Q96NF6 230 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 DPYSL5Q9BPU6 564 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 OR10A2Q9H208 303 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 MAPRE3Q9UPY8 281 aa8.13□□□□□ -1.11
SF3B1-212ENST00000496458 CD40P25942 277 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 MAGEA10P43363 369 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 SMAD3P84022 425 aaKnown RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 OCRLQ01968 901 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 ICAM4Q14773 271 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 TIGD7Q6NT04 549 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 TTC9BQ8N6N2 239 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 GIMAP8Q8ND71 665 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 OR14K1Q8NGZ2 314 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 RPGRQ92834 1020 aaKnown RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 SAE1Q9UBE0 346 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-212ENST00000496458 OAZ3Q9UMX2 235 aa8.12□□□□□ -1.11
SF3B1-212ENST00000496458 FKBP9O95302 570 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 LSSP48449 732 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 ANTXR2P58335 489 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 ADCY2Q08462 1091 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 NFYCQ13952 458 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 DGKDQ16760 1214 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 FKBP9P1Q75LS8 142 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 TAX1BP1Q86VP1 789 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 THNSL2Q86YJ6 484 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 C12orf65Q9H3J6 166 aaKnown RBP8.11□□□□□ -1.11
SF3B1-212ENST00000496458 KCMF1Q9P0J7 381 aa8.11□□□□□ -1.11
SF3B1-212ENST00000496458 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
SF3B1-212ENST00000496458 CDC14BO60729 498 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
SF3B1-212ENST00000496458 ADRB1P08588 477 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 CR2P20023 1033 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 BCAR1P56945 870 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 NFKB2Q00653 900 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 ADAM15Q13444 863 aa8.1□□□□□ -1.11
SF3B1-212ENST00000496458 LRRC32Q14392 662 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms