RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
PHF1-211ENST00000495509 UPF3AQ9H1J1 476 aaKnown RBP17.4■□□□□ 0.38
PHF1-211ENST00000495509 XPNPEP1Q9NQW7 623 aa17.4■□□□□ 0.38
PHF1-211ENST00000495509 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
PHF1-211ENST00000495509 EVPLQ92817 2033 aa17.39■□□□□ 0.38
PHF1-211ENST00000495509 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 INSRRP14616 1297 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 PRCPP42785 496 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 LRRC41Q15345 812 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 KIAA0895Q8NCT3 520 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 XPNPEP3Q9NQH7 507 aa17.39■□□□□ 0.37
PHF1-211ENST00000495509 DDX20Q9UHI6 824 aaKnown RBP17.39■□□□□ 0.37
PHF1-211ENST00000495509 HBP1O60381 514 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 ADAMTS4O75173 837 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 TBCAO75347 108 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 DGAT1O75907 488 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 FAM102BQ5T8I3 360 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 MYCT1Q8N699 235 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 CCDC47Q96A33 483 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 DHX33Q9H6R0 707 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 CBX8Q9HC52 389 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 HMX1Q9NP08 348 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 FAM13AO94988 1023 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 HSPA1AP0DMV8 641 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 HSPA1BP0DMV9 641 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 ZNF165P49910 485 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 ZNF131P52739 623 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 PURAQ00577 322 aaKnown RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 BRDTQ58F21 947 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 LHX8Q68G74 356 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 TMEM143Q96AN5 459 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 MED15Q96RN5 788 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
PHF1-211ENST00000495509 ODF2LQ9ULJ1 636 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
PHF1-211ENST00000495509 F2P00734 622 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 IGBP1P78318 339 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 NKX3-2P78367 333 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 EMC2Q15006 297 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 KIAA0753Q2KHM9 967 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 FAM26FQ5R3K3 315 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 PARVGQ9HBI0 331 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 DNAH12Q6ZR08 3092 aa17.37■□□□□ 0.37
PHF1-211ENST00000495509 TRIP12Q14669 1992 aaPredicted RBP17.36■□□□□ 0.37
PHF1-211ENST00000495509 MAFO75444 373 aaPredicted RBP17.36■□□□□ 0.37
PHF1-211ENST00000495509 CASP5P51878 434 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 TBC1D8BQ0IIM8 1120 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 PSMD2Q13200 908 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 DRP2Q13474 957 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 MFSD10Q14728 455 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 KLHDC9Q8NEP7 349 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 FIZ1Q96SL8 496 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 UNC93B1Q9H1C4 597 aa17.36■□□□□ 0.37
PHF1-211ENST00000495509 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 HAS3O00219 553 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 GAP43P17677 238 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 NMT1P30419 496 aaKnown RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 PSEN2P49810 448 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 IQCB1Q15051 598 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MTFR1Q15390 333 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 KCNA10Q16322 511 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 SLC9C1Q4G0N8 1177 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 ODR4Q5SWX8 454 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 CCSAPQ6IQ19 270 aaPredicted RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 ADSSL1Q8N142 457 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 SLC7A3Q8WY07 619 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 BSNDQ8WZ55 320 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 SUGCTQ9HAC7 445 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MYBP10242 640 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 KLRC1P26715 233 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 RFC5P40937 340 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 STX17P56962 302 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 HIC1Q14526 733 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 ZNF484Q5JVG2 852 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 DHX40Q8IX18 779 aaKnown RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 LRRC71Q8N4P6 559 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 FAM200AQ8TCP9 573 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 DRC1Q96MC2 740 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 TIPINQ9BVW5 301 aa17.35■□□□□ 0.37
PHF1-211ENST00000495509 MRPL44Q9H9J2 332 aaKnown RBP17.35■□□□□ 0.37
PHF1-211ENST00000495509 IGKV6-21A0A0C4DH24 114 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 ASGR1P07306 291 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 SMIM10L2AP0DMW4 78 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 SMIM10L2BP0DMW5 78 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 PLS3P13797 630 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms