RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 IGKV6D-21A0A0A0MT36 114 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 ENPP3O14638 875 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 GTPBP6O43824 516 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 CAND2O75155 1236 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 AMHP03971 560 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 PYGBP11216 843 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 GNAT1P11488 350 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 SCG2P13521 617 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 GATMP50440 423 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 CCT2P78371 535 aaKnown RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 MRPS6P82932 125 aaKnown RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 GPS2Q13227 327 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 KRT32Q14532 448 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 EPC2Q52LR7 807 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 ABHD15Q6UXT9 468 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 RPAINQ86UA6 219 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 PLA2G4DQ86XP0 818 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 GIMAP8Q8ND71 665 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 FBXO22Q8NEZ5 403 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 LENG9Q96B70 501 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 CDHR1Q96JP9 859 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 SMARCAD1Q9H4L7 1026 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 RC3H2Q9HBD1 1191 aaKnown RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 ERAP1Q9NZ08 941 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 FEZ2Q9UHY8 353 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-234ENST00000493923 INSL6Q9Y581 213 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 NFASCO94856 1347 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 TRIOO75962 3097 aa9.19□□□□□ -0.94
HDAC6-234ENST00000493923 PRPF3O43395 683 aaKnown RBP9.18□□□□□ -0.94
HDAC6-234ENST00000493923 ST18O60284 1047 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 MGEA5O60502 916 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 EFCAB14O75071 495 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 PDIA3P30101 505 aaKnown RBP9.18□□□□□ -0.94
HDAC6-234ENST00000493923 MCM2P49736 904 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM266Q2M3C6 531 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 RALGAPA2Q2PPJ7 1873 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 BLOC1S2Q6QNY1 142 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM192Q8IY95 271 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 KIF18AQ8NI77 898 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 KIAA1524Q8TCG1 905 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM40Q8WWA1 233 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
HDAC6-234ENST00000493923 AIFM3Q96NN9 605 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 YME1L1Q96TA2 773 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 ZMYND12Q9H0C1 365 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 FAM53CQ9NYF3 392 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 VPS54Q9P1Q0 977 aa9.18□□□□□ -0.94
HDAC6-234ENST00000493923 ESYT2A0FGR8 921 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 POTEB3A0JP26 581 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 SYCE3A1L190 88 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 GRM6O15303 877 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 MAFGO15525 162 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 CSPG5O95196 566 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 FOSP01100 380 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 CYP3A4P08684 503 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 PSEN1P49768 467 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 STAT5BP51692 787 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 GTF2A1P52655 376 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 RCAN1P53805 252 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 TPM4P67936 248 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 NCBP1Q09161 790 aaKnown RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 GPM6BQ13491 265 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 BMS1Q14692 1282 aaKnown RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 NPY5RQ15761 445 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 TAF2Q6P1X5 1199 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 POTEBQ6S5H4 581 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 MTHFD1LQ6UB35 978 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 TSHZ1Q6ZSZ6 1077 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 PLPPR4Q7Z2D5 763 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 TRMT1LQ7Z2T5 733 aaKnown RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 HLA-CQ95604 372 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 NCAPGQ9BPX3 1015 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 SDF4Q9BRK5 362 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 SLC26A6Q9BXS9 759 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 UPF3BQ9BZI7 483 aaKnown RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 UBE2ZQ9H832 354 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 HCSTQ9UBK5 93 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 NOC2LQ9Y3T9 749 aaKnown RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 PCDHA2Q9Y5H9 948 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 TRPV2Q9Y5S1 764 aa9.17□□□□□ -0.94
HDAC6-234ENST00000493923 V9GYY5 206 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 FNDC1Q4ZHG4 1894 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-234ENST00000493923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 POTEMA6NI47 508 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 RRN3P2A6NIE6 340 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 H3BNC9 293 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 hCG_1984214I3L0E3 225 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 KIF2AO00139 706 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF862O60290 1169 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 PRPF40AO75400 957 aaKnown RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 HMGB1P09429 215 aaKnown RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 IFNAR1P17181 557 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 IBSPP21815 317 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms