RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 KIF5AQ12840 1032 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 SCYL3Q8IZE3 742 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 SAMD3Q8N6K7 520 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 TSGA10Q9BZW7 698 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 NUCKS1Q9H1E3 243 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 DOCK1Q14185 1865 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 DHX15O43143 795 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 AKAP3O75969 853 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 LCA5LO95447 670 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 ZNF131P52739 623 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 TRAPPC11Q7Z392 1133 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 BORCS6Q96GS4 357 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 AGO4Q9HCK5 861 aaKnown RBP15.09■□□□□ 0.01
VCP-207ENST00000493886 JADE2Q9NQC1 790 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 SEL1LQ9UBV2 794 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 ODF2LQ9ULJ1 636 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 PCDHA13Q9Y5I0 950 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 SAR1BQ9Y6B6 198 aa15.09■□□□□ 0.01
VCP-207ENST00000493886 CLIC2O15247 247 aa15.08■□□□□ 0
VCP-207ENST00000493886 TGFB1I1O43294 461 aa15.08■□□□□ 0
VCP-207ENST00000493886 BACE1P56817 501 aa15.08■□□□□ 0
VCP-207ENST00000493886 APBA1Q02410 837 aa15.08■□□□□ 0
VCP-207ENST00000493886 HNRNPLLQ8WVV9 542 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0
VCP-207ENST00000493886 SYN2Q92777 582 aaPredicted RBP15.08■□□□□ 0
VCP-207ENST00000493886 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
VCP-207ENST00000493886 ZNF112Q9UJU3 913 aa15.08■□□□□ 0
VCP-207ENST00000493886 PNMA2Q9UL42 364 aa15.08■□□□□ 0
VCP-207ENST00000493886 SSU72P8A0A1W2PR75 194 aa15.08■□□□□ 0
VCP-207ENST00000493886 ARHGEF35A5YM69 484 aa15.08■□□□□ 0
VCP-207ENST00000493886 SLC16A3O15427 465 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 EIF3JO75822 258 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 AFPP02771 609 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 EPB41P11171 864 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 ITGB3BPQ13352 177 aaPredicted RBP15.08■□□□□ 0
VCP-207ENST00000493886 SKIDA1Q1XH10 827 aa15.08■□□□□ 0
VCP-207ENST00000493886 ZC2HC1CQ53FD0 456 aaPredicted RBP15.08■□□□□ 0
VCP-207ENST00000493886 ANGEL2Q5VTE6 544 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 SFMBT2Q5VUG0 894 aa15.08■□□□□ 0
VCP-207ENST00000493886 PRAMEF18Q5VWM3 479 aa15.08■□□□□ 0
VCP-207ENST00000493886 HGSNATQ68CP4 663 aa15.08■□□□□ 0
VCP-207ENST00000493886 RIN2Q8WYP3 895 aaPredicted RBP15.08■□□□□ 0
VCP-207ENST00000493886 ATG4CQ96DT6 458 aa15.08■□□□□ 0
VCP-207ENST00000493886 WRNIP1Q96S55 665 aa15.08■□□□□ 0
VCP-207ENST00000493886 FIZ1Q96SL8 496 aa15.08■□□□□ 0
VCP-207ENST00000493886 METTL14Q9HCE5 456 aaKnown RBP15.08■□□□□ 0
VCP-207ENST00000493886 ZMYM2Q9UBW7 1377 aa15.08■□□□□ 0
VCP-207ENST00000493886 TTC36A6NLP5 189 aa15.07■□□□□ 0
VCP-207ENST00000493886 VWA5AO00534 786 aa15.07■□□□□ 0
VCP-207ENST00000493886 USO1O60763 962 aaKnown RBP15.07■□□□□ 0
VCP-207ENST00000493886 P4HBP07237 508 aaKnown RBP15.07■□□□□ 0
VCP-207ENST00000493886 FDX1P10109 184 aa15.07■□□□□ 0
VCP-207ENST00000493886 XRCC5P13010 732 aaKnown RBP15.07■□□□□ 0
VCP-207ENST00000493886 CASP4P49662 377 aa15.07■□□□□ 0
VCP-207ENST00000493886 MTMR1Q13613 665 aa15.07■□□□□ 0
VCP-207ENST00000493886 ASTE1Q2TB18 679 aaPredicted RBP15.07■□□□□ 0
VCP-207ENST00000493886 FAM178BQ8IXR5 827 aa15.07■□□□□ 0
VCP-207ENST00000493886 GANQ9H2C0 597 aa15.07■□□□□ 0
VCP-207ENST00000493886 AS3MTQ9HBK9 375 aa15.07■□□□□ 0
VCP-207ENST00000493886 PICK1Q9NRD5 415 aa15.07■□□□□ 0
VCP-207ENST00000493886 LOXHD1Q8IVV2 1947 aa15.07■□□□□ 0
VCP-207ENST00000493886 TLR2O60603 784 aa15.07■□□□□ 0
VCP-207ENST00000493886 PTPRAP18433 802 aa15.07■□□□□ 0
VCP-207ENST00000493886 GUCY2CP25092 1073 aa15.07■□□□□ 0
VCP-207ENST00000493886 C2orf54Q08AI8 447 aa15.07■□□□□ 0
VCP-207ENST00000493886 PGM5Q15124 567 aa15.07■□□□□ 0
VCP-207ENST00000493886 TDRD12Q587J7 1177 aaKnown RBP15.07■□□□□ 0
VCP-207ENST00000493886 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
VCP-207ENST00000493886 ZNF720Q7Z2F6 126 aa15.07■□□□□ 0
VCP-207ENST00000493886 ZNF280CQ8ND82 737 aa15.07■□□□□ 0
VCP-207ENST00000493886 WNK4Q96J92 1243 aa15.07■□□□□ 0
VCP-207ENST00000493886 PLEKHA4Q9H4M7 779 aa15.07■□□□□ 0
VCP-207ENST00000493886 SLC9C1Q4G0N8 1177 aa15.06■□□□□ 0
VCP-207ENST00000493886 DCAF17Q5H9S7 520 aaPredicted RBP15.06■□□□□ 0
VCP-207ENST00000493886 ODR4Q5SWX8 454 aa15.06■□□□□ 0
VCP-207ENST00000493886 NSMFQ6X4W1 530 aa15.06■□□□□ 0
VCP-207ENST00000493886 RNF207Q6ZRF8 634 aa15.06■□□□□ 0
VCP-207ENST00000493886 APOBEC3FQ8IUX4 373 aaKnown RBP15.06■□□□□ 0
VCP-207ENST00000493886 FBXO41Q8TF61 875 aa15.06■□□□□ 0
VCP-207ENST00000493886 IKZF4Q9H2S9 585 aa15.06■□□□□ 0
VCP-207ENST00000493886 FZD1Q9UP38 647 aa15.06■□□□□ 0
VCP-207ENST00000493886 UBE4BO95155 1302 aa15.06■□□□□ 0
VCP-207ENST00000493886 PDE2AO00408 941 aaPredicted RBP15.06■□□□□ 0
VCP-207ENST00000493886 SERPING1P05155 500 aa15.06■□□□□ 0
VCP-207ENST00000493886 MYCLP12524 364 aaPredicted RBP15.06■□□□□ 0
VCP-207ENST00000493886 MATR3P43243 847 aaKnown RBP eCLIP15.06■□□□□ 08e-9■■■■■ 35.3
VCP-207ENST00000493886 STXBP4Q6ZWJ1 553 aa15.06■□□□□ 0
VCP-207ENST00000493886 KSR1Q8IVT5 923 aa15.06■□□□□ 0
VCP-207ENST00000493886 EXOC4Q96A65 974 aa15.06■□□□□ 0
VCP-207ENST00000493886 RMDN3Q96TC7 470 aa15.06■□□□□ 0
VCP-207ENST00000493886 SMARCAL1Q9NZC9 954 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms