RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 FBXL18Q96ME1 805 aa25.55■■□□□ 1.68
HMG20B-214ENST00000493191 TLR9Q9NR96 1032 aa25.55■■□□□ 1.68
HMG20B-214ENST00000493191 TBC1D22BQ9NU19 505 aa25.55■■□□□ 1.68
HMG20B-214ENST00000493191 RNF216Q9NWF9 866 aaPredicted RBP25.55■■□□□ 1.68
HMG20B-214ENST00000493191 GPR32O75388 356 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 FGF18O76093 207 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 HMGB1P09429 215 aaKnown RBP25.54■■□□□ 1.68
HMG20B-214ENST00000493191 FGFR1P11362 822 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 RBM10P98175 930 aaKnown RBP25.54■■□□□ 1.68
HMG20B-214ENST00000493191 UBE3AQ05086 875 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 ZNF746Q6NUN9 644 aaPredicted RBP25.54■■□□□ 1.68
HMG20B-214ENST00000493191 THNSL1Q8IYQ7 743 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 ZMYND12Q9H0C1 365 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 ATP6V0A4Q9HBG4 840 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 C6orf50Q9HD87 102 aa25.54■■□□□ 1.68
HMG20B-214ENST00000493191 ESYT2A0FGR8 921 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 PSAPP07602 524 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 ERVFC1P60507 584 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 SETQ01105 290 aaPredicted RBP25.53■■□□□ 1.68
HMG20B-214ENST00000493191 PRR16Q569H4 304 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 REXO1Q8N1G1 1221 aaKnown RBP25.53■■□□□ 1.68
HMG20B-214ENST00000493191 COLGALT1Q8NBJ5 622 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 GABBR1Q9UBS5 961 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 TCEAL9Q9UHQ7 104 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 USP15Q9Y4E8 981 aaPredicted RBP25.53■■□□□ 1.68
HMG20B-214ENST00000493191 PCDHA10Q9Y5I2 948 aa25.53■■□□□ 1.68
HMG20B-214ENST00000493191 CCDC196A0A1B0GTZ2 297 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 CLCN3P51790 818 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 FAM189BP81408 668 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 PKN1Q16512 942 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 Q6ZUG5 572 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 SMAP1Q8IYB5 467 aaPredicted RBP25.52■■□□□ 1.68
HMG20B-214ENST00000493191 VN1R2Q8NFZ6 395 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 RASGRP4Q8TDF6 673 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 EDAQ92838 391 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 MFSD14AQ96MC6 490 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 CWH43Q9H720 699 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 TMEM161AQ9NX61 479 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 SAMM50Q9Y512 469 aa25.52■■□□□ 1.68
HMG20B-214ENST00000493191 WDR81Q562E7 1941 aa25.51■■□□□ 1.67
HMG20B-214ENST00000493191 CDC45O75419 566 aa25.51■■□□□ 1.67
HMG20B-214ENST00000493191 DSC3Q14574 896 aa25.51■■□□□ 1.67
HMG20B-214ENST00000493191 CCDC12Q8WUD4 166 aaPredicted RBP25.51■■□□□ 1.67
HMG20B-214ENST00000493191 BRF1Q92994 677 aa25.51■■□□□ 1.67
HMG20B-214ENST00000493191 LOC730098B7Z3J9 87 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 PRPF3O43395 683 aaKnown RBP25.5■■□□□ 1.67
HMG20B-214ENST00000493191 NLRP11P59045 1033 aaKnown RBP25.5■■□□□ 1.67
HMG20B-214ENST00000493191 NHLH1Q02575 133 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 MCTP2Q6DN12 878 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 EFCAB12Q6NXP0 572 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 PHKBQ93100 1093 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 KCNH6Q9H252 994 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 ELAC1Q9H777 363 aaKnown RBP25.5■■□□□ 1.67
HMG20B-214ENST00000493191 CEP131Q9UPN4 1083 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 AKT3Q9Y243 479 aa25.5■■□□□ 1.67
HMG20B-214ENST00000493191 FSCN2O14926 492 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 MAGEB2O15479 319 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 LAG3P18627 525 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 GNA11P29992 359 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 DUSP6Q16828 381 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 LRRC71Q8N4P6 559 aa25.49■■□□□ 1.67
HMG20B-214ENST00000493191 ZNF668Q96K58 619 aaPredicted RBP25.49■■□□□ 1.67
HMG20B-214ENST00000493191 JAKMIP1Q96N16 626 aaKnown RBP25.49■■□□□ 1.67
HMG20B-214ENST00000493191 CIITAP33076 1130 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 MRE11P49959 708 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 PLPP4Q5VZY2 271 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 LRRC55Q6ZSA7 311 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 LENG9Q96B70 501 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 RPGRIP1Q96KN7 1286 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 FAM167AQ96KS9 214 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 CASD1Q96PB1 797 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 MAP7D2Q96T17 732 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 CDCA3Q99618 268 aaPredicted RBP25.48■■□□□ 1.67
HMG20B-214ENST00000493191 PHF7Q9BWX1 381 aaPredicted RBP25.48■■□□□ 1.67
HMG20B-214ENST00000493191 TMEM117Q9H0C3 514 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 ADAMTS10Q9H324 1103 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 RNF19AQ9NV58 838 aa25.48■■□□□ 1.67
HMG20B-214ENST00000493191 AKAP17AQ02040 695 aaKnown RBP25.47■■□□□ 1.67
HMG20B-214ENST00000493191 CBX2Q14781 532 aaPredicted RBP25.47■■□□□ 1.67
HMG20B-214ENST00000493191 PDE12Q6L8Q7 609 aaKnown RBP25.47■■□□□ 1.67
HMG20B-214ENST00000493191 TRIM67Q6ZTA4 783 aa25.47■■□□□ 1.67
HMG20B-214ENST00000493191 CENPQQ7L2Z9 268 aaPredicted RBP25.47■■□□□ 1.67
HMG20B-214ENST00000493191 LINC01465Q8N7H1 131 aa25.47■■□□□ 1.67
HMG20B-214ENST00000493191 MRPS27Q92552 414 aaKnown RBP25.47■■□□□ 1.67
HMG20B-214ENST00000493191 DISC1Q9NRI5 854 aa25.47■■□□□ 1.67
HMG20B-214ENST00000493191 TMEM221A6NGB7 291 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 WDR64B1ANS9 1081 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 M0R296 226 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 ZNF862O60290 1169 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 ZSCAN20P17040 1043 aaPredicted RBP25.46■■□□□ 1.67
HMG20B-214ENST00000493191 TMOD1P28289 359 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 PBX3P40426 434 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 KCNB2Q92953 911 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 NRBP2Q9NSY0 501 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 PUF60Q9UHX1 559 aaKnown RBP25.46■■□□□ 1.67
HMG20B-214ENST00000493191 LZTS1Q9Y250 596 aa25.46■■□□□ 1.67
HMG20B-214ENST00000493191 MSH4O15457 936 aa25.45■■□□□ 1.66
HMG20B-214ENST00000493191 HOXA2O43364 376 aa25.45■■□□□ 1.66
HMG20B-214ENST00000493191 EDIL3O43854 480 aa25.45■■□□□ 1.66
HMG20B-214ENST00000493191 OATP04181 439 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms