RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 DLG4P78352 724 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 LXNQ9BS40 222 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 PARVGQ9HBI0 331 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 SIX2Q9NPC8 291 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 TAS2R14Q9NYV8 317 aa17.15■□□□□ 0.34
BRD9-208ENST00000489816 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
BRD9-208ENST00000489816 ZEB2O60315 1214 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 EXOC3O60645 756 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 DRAP1Q14919 205 aaPredicted RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 VIPAS39Q9H9C1 493 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 AARSP49588 968 aaKnown RBP eCLIP17.14■□□□□ 0.331e-6■■■■■ 29.7
BRD9-208ENST00000489816 CEP55Q53EZ4 464 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 TAF3Q5VWG9 929 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 ZNF746Q6NUN9 644 aaPredicted RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 C1orf186Q6ZWK4 172 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 PEX26Q7Z412 305 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 METTL13Q8N6R0 699 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 DNAJC12Q9UKB3 198 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 GOLGA8IPA6NC78 632 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 GOLGA8JA6NMD2 632 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 IPO5O00410 1097 aaKnown RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 NFIBO00712 420 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 SP4Q02446 784 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
BRD9-208ENST00000489816 SYN2Q92777 582 aaPredicted RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 CELF4Q9BZC1 486 aaKnown RBP17.14■□□□□ 0.33
BRD9-208ENST00000489816 FOCADQ5VW36 1801 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 TBX3O15119 743 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 PSMD10O75832 226 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 GALCP54803 685 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 GPRC5CQ9NQ84 441 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 PSD3Q9NYI0 1048 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 AMACRQ9UHK6 382 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 NR2E1Q9Y466 385 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 PCDHGC5Q9Y5F6 944 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 INPP5BP32019 993 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 EPHB4P54760 987 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
BRD9-208ENST00000489816 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
BRD9-208ENST00000489816 LTBP1Q14766 1721 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 HSF2BPO75031 334 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 KIF4AO95239 1232 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 CIITAP33076 1130 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
BRD9-208ENST00000489816 PDCLQ13371 301 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 IFT20Q8IY31 132 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 ZMYM2Q9UBW7 1377 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 HIP1RO75146 1068 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 ALAS1P13196 640 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 STAT1P42224 750 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 AADACL2Q6P093 401 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 MAATS1Q7Z4T9 603 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 DPH5Q9H2P9 285 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 RRP15Q9Y3B9 282 aaKnown RBP17.12■□□□□ 0.33
BRD9-208ENST00000489816 IGSF9BQ9UPX0 1349 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 MYO1CO00159 1063 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 FLOT1O75955 427 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 ITGB5P18084 799 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 GCLMP48507 274 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 PRELPP51888 382 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 CFAP58Q5T655 872 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
BRD9-208ENST00000489816 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
BRD9-208ENST00000489816 K7ENM7 598 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
BRD9-208ENST00000489816 CCT5P48643 541 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 FMO5P49326 533 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 KAT5Q92993 513 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
BRD9-208ENST00000489816 KIFC3Q9BVG8 833 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 FAM107BQ9H098 131 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 AGPAT3Q9NRZ7 376 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRD9-208ENST00000489816 CCPG1Q9ULG6 757 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 EIF2AK2P19525 551 aaKnown RBP17.11■□□□□ 0.33
BRD9-208ENST00000489816 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms