RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 GSE1Q14687 1217 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
CTNS-206ENST00000488623 HERC4Q5GLZ8 1057 aaPredicted RBP16.78■□□□□ 0.28
CTNS-206ENST00000488623 MAEAQ7L5Y9 396 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 SMYD4Q8IYR2 804 aaPredicted RBP16.78■□□□□ 0.28
CTNS-206ENST00000488623 DAW1Q8N136 415 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 MLKLQ8NB16 471 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 KAT2BQ92831 832 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 TUT1Q9H6E5 874 aaKnown RBP16.78■□□□□ 0.28
CTNS-206ENST00000488623 XPNPEP1Q9NQW7 623 aa16.78■□□□□ 0.28
CTNS-206ENST00000488623 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 DGAT1O75907 488 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 PGK1P00558 417 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 MYL3P08590 195 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
CTNS-206ENST00000488623 ZNF131P52739 623 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 SLC9C1Q4G0N8 1177 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
CTNS-206ENST00000488623 SH3TC2Q8TF17 1288 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 TIPINQ9BVW5 301 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
CTNS-206ENST00000488623 SLC39A2Q9NP94 309 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 GPRC5CQ9NQ84 441 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 DDX20Q9UHI6 824 aaKnown RBP16.77■□□□□ 0.28
CTNS-206ENST00000488623 ODF2LQ9ULJ1 636 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
CTNS-206ENST00000488623 BRCA2P51587 3418 aa16.77■□□□□ 0.27
CTNS-206ENST00000488623 MYH11P35749 1972 aa16.77■□□□□ 0.27
CTNS-206ENST00000488623 ADAMTS4O75173 837 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 TBCAO75347 108 aaKnown RBP16.76■□□□□ 0.27
CTNS-206ENST00000488623 FAM13AO94988 1023 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 INSRRP14616 1297 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 PRCPP42785 496 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 GNASQ5JWF2 1037 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 MYCT1Q8N699 235 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 KIAA0895Q8NCT3 520 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 KLHDC9Q8NEP7 349 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 HMX1Q9NP08 348 aaPredicted RBP16.76■□□□□ 0.27
CTNS-206ENST00000488623 XPNPEP3Q9NQH7 507 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 ZNF215Q9UL58 517 aaPredicted RBP16.76■□□□□ 0.27
CTNS-206ENST00000488623 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 PPME1Q9Y570 386 aa16.76■□□□□ 0.27
CTNS-206ENST00000488623 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 HAS3O00219 553 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 KPNA6O60684 536 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 MAFO75444 373 aaPredicted RBP16.75■□□□□ 0.27
CTNS-206ENST00000488623 F2P00734 622 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 GAP43P17677 238 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 RFC5P40937 340 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 PSEN2P49810 448 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 ZNF165P49910 485 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 PURAQ00577 322 aaKnown RBP16.75■□□□□ 0.27
CTNS-206ENST00000488623 EMC2Q15006 297 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 LHX8Q68G74 356 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
CTNS-206ENST00000488623 ADSSL1Q8N142 457 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 TRAPPC12Q8WVT3 735 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 ZNF333Q96JL9 665 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 GTPBP4Q9BZE4 634 aaKnown RBP16.75■□□□□ 0.27
CTNS-206ENST00000488623 PARVGQ9HBI0 331 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
CTNS-206ENST00000488623 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 CAVIN2O95810 425 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 POLGP54098 1239 aaPredicted RBP16.74■□□□□ 0.27
CTNS-206ENST00000488623 MFSD10Q14728 455 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 IQCB1Q15051 598 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 LRRC41Q15345 812 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 COBLL1Q53SF7 1204 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 MED15Q96RN5 788 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 FIZ1Q96SL8 496 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 BPIFA3Q9BQP9 254 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
CTNS-206ENST00000488623 KAT6AQ92794 2004 aa16.74■□□□□ 0.27
CTNS-206ENST00000488623 ZEB2O60315 1214 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 PLS3P13797 630 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 KLRC1P26715 233 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 CST5P28325 142 aaPredicted RBP16.73■□□□□ 0.27
CTNS-206ENST00000488623 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
CTNS-206ENST00000488623 ARL2P36404 184 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 TBC1D8BQ0IIM8 1120 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
CTNS-206ENST00000488623 KCNA10Q16322 511 aa16.73■□□□□ 0.27
CTNS-206ENST00000488623 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
CTNS-206ENST00000488623 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms