RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ACRV1P26436 265 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 MECP2P51608 486 aaKnown RBP6.18□□□□□ -1.42
GCFC2-209ENST00000486016 STAT5BP51692 787 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
GCFC2-209ENST00000486016 BRAPQ7Z569 592 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 CACTINQ8WUQ7 758 aaKnown RBP6.18□□□□□ -1.42
GCFC2-209ENST00000486016 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 NELFAQ9H3P2 528 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 HECAQ9UBI9 543 aaPredicted RBP6.18□□□□□ -1.42
GCFC2-209ENST00000486016 SFMBT1Q9UHJ3 866 aa6.18□□□□□ -1.42
GCFC2-209ENST00000486016 MSX2P35548 267 aaPredicted RBP6.17□□□□□ -1.42
GCFC2-209ENST00000486016 PTH1RQ03431 593 aa6.17□□□□□ -1.42
GCFC2-209ENST00000486016 TMEM177Q53S58 311 aa6.17□□□□□ -1.42
GCFC2-209ENST00000486016 IGSF22Q8N9C0 903 aa6.17□□□□□ -1.42
GCFC2-209ENST00000486016 ZSWIM2Q8NEG5 633 aa6.17□□□□□ -1.42
GCFC2-209ENST00000486016 OR14K1Q8NGZ2 314 aa6.17□□□□□ -1.42
GCFC2-209ENST00000486016 THAP3Q8WTV1 239 aaPredicted RBP6.17□□□□□ -1.42
GCFC2-209ENST00000486016 ZNF703Q9H7S9 590 aaPredicted RBP6.17□□□□□ -1.42
GCFC2-209ENST00000486016 CTDP1Q9Y5B0 961 aaPredicted RBP6.17□□□□□ -1.42
GCFC2-209ENST00000486016 SLC26A4O43511 780 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 C1SP09871 688 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 MEOX1P50221 254 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 ALDH6A1Q02252 535 aaKnown RBP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 SAFB2Q14151 953 aaKnown RBP eCLIP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 CC2D1AQ6P1N0 951 aaPredicted RBP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 C1orf210Q8IVY1 113 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 RTKN2Q8IZC4 609 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 LILRB2Q8N423 598 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 HIPK4Q8NE63 616 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 WDR26Q9H7D7 661 aa6.16□□□□□ -1.42
GCFC2-209ENST00000486016 NCOA5Q9HCD5 579 aaKnown RBP6.16□□□□□ -1.42
GCFC2-209ENST00000486016 DVL2O14641 736 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 INHBEP58166 350 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 GRM7Q14831 915 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 TMEM132BQ14DG7 1078 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 C2orf27AQ580R0 203 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 FNDC7Q5VTL7 733 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 ADGRE4PQ86SQ3 457 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 ZNF575Q86XF7 245 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 AMER2Q8N7J2 671 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
GCFC2-209ENST00000486016 FOXB1Q99853 325 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 TLR9Q9NR96 1032 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 VWA7Q9Y334 891 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 PTCH2Q9Y6C5 1203 aa6.15□□□□□ -1.42
GCFC2-209ENST00000486016 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 ZNF202O95125 648 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 ADCY7P51828 1080 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 ADAM8P78325 824 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 IRF9Q00978 393 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 LSM12Q3MHD2 195 aaKnown RBP6.14□□□□□ -1.43
GCFC2-209ENST00000486016 SHCBP1Q8NEM2 672 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 WDR48Q8TAF3 677 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 CALML6Q8TD86 181 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 CLUHP3Q96NS8 147 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 BOCQ9BWV1 1114 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 CEP72Q9P209 647 aa6.14□□□□□ -1.43
GCFC2-209ENST00000486016 HIBADHP31937 336 aaKnown RBP6.13□□□□□ -1.43
GCFC2-209ENST00000486016 ADAM15Q13444 863 aa6.13□□□□□ -1.43
GCFC2-209ENST00000486016 RIN1Q13671 783 aa6.13□□□□□ -1.43
GCFC2-209ENST00000486016 C2orf69Q8N8R5 385 aa6.13□□□□□ -1.43
GCFC2-209ENST00000486016 RABGGTAQ92696 567 aa6.13□□□□□ -1.43
GCFC2-209ENST00000486016 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
GCFC2-209ENST00000486016 PLD2O14939 933 aa6.12□□□□□ -1.43
GCFC2-209ENST00000486016 FNTBP49356 437 aa6.12□□□□□ -1.43
GCFC2-209ENST00000486016 ANTXR2P58335 489 aa6.12□□□□□ -1.43
GCFC2-209ENST00000486016 ABHD18Q0P651 414 aa6.12□□□□□ -1.43
GCFC2-209ENST00000486016 NKD2Q969F2 451 aaPredicted RBP6.12□□□□□ -1.43
GCFC2-209ENST00000486016 CHFRQ96EP1 664 aa6.12□□□□□ -1.43
GCFC2-209ENST00000486016 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 TRAF5O00463 557 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 HIP1RO75146 1068 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 PRLP01236 227 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 STAT3P40763 770 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 ACAP1Q15027 740 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 ARHGAP44Q17R89 818 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 SOGA3Q5TF21 947 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 ZCCHC8Q6NZY4 707 aaKnown RBP6.11□□□□□ -1.43
GCFC2-209ENST00000486016 KLHDC10Q6PID8 442 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 ERCC4Q92889 916 aaPredicted RBP6.11□□□□□ -1.43
GCFC2-209ENST00000486016 LPPQ93052 612 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 PLEKHG4BQ96PX9 1271 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 GPHA2Q96T91 129 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 CSRNP2Q9H175 543 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 AURKAIP1Q9NWT8 199 aaPredicted RBP6.11□□□□□ -1.43
GCFC2-209ENST00000486016 FAM184BQ9ULE4 1060 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 SH3BP1Q9Y3L3 701 aa6.11□□□□□ -1.43
GCFC2-209ENST00000486016 M0R2C6 588 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 GLRX3O76003 335 aaKnown RBP6.1□□□□□ -1.43
GCFC2-209ENST00000486016 RAPGEF3O95398 923 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 RGS3P49796 1198 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 ATP2C1P98194 919 aaPredicted RBP6.1□□□□□ -1.43
GCFC2-209ENST00000486016 DPTQ07507 201 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 MAP3K12Q12852 859 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 TMPRSS6Q8IU80 811 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 TMEM176AQ96HP8 235 aa6.1□□□□□ -1.43
GCFC2-209ENST00000486016 C16orf92Q96LL3 132 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms