RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 ZNF746Q6NUN9 644 aaPredicted RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 FAM117BQ6P1L5 589 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 MIER3Q7Z3K6 550 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 RTN4RL1Q86UN2 441 aaPredicted RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 BANK1Q8NDB2 785 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 TRAPPC12Q8WVT3 735 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 APBB2Q92870 758 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 DYDC2Q96IM9 177 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 HSD17B14Q9BPX1 270 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 SH2D3AQ9BRG2 576 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 AGO3Q9H9G7 860 aaKnown RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 GDPD2Q9HCC8 539 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 GABBR1Q9UBS5 961 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 RCOR1Q9UKL0 485 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 INSL6Q9Y581 213 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
HMG20B-210ENST00000483417 CDY2AQ9Y6F7 541 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 SQORQ9Y6N5 450 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 TCHHQ07283 1943 aa10.78□□□□□ -0.68
HMG20B-210ENST00000483417 REV3LO60673 3130 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 SMIM35A0A1B0GVV1 85 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 POTEB3A0JP26 581 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 VWA3AA6NCI4 1184 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 HBP1O60381 514 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 MED24O75448 989 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 RPLP2P05387 115 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 GHRP10912 638 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 IGBP1P78318 339 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 NUCB2P80303 420 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 MRPS6P82932 125 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 KRT76Q01546 638 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 EPHA7Q15375 998 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 POTEBQ6S5H4 581 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 DTHD1Q6ZMT9 781 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 SLFN12Q8IYM2 578 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 MYOCDQ8IZQ8 938 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 ATP8B4Q8TF62 1192 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 TNPO1Q92973 898 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 EPSTI1Q96J88 318 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 ASB2Q96Q27 587 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 TGS1Q96RS0 853 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 EIF2AK1Q9BQI3 630 aaKnown RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 LMCD1Q9NZU5 365 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
HMG20B-210ENST00000483417 SAMM50Q9Y512 469 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 VCANP13611 3396 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 SIP14410 1827 aa10.77□□□□□ -0.69
HMG20B-210ENST00000483417 MICAL3Q7RTP6 2002 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 BACH1O14867 736 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 PSAPP07602 524 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 LINC00271P0C7V0 271 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 KLRC1P26715 233 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMG20B-210ENST00000483417 CYP4A11Q02928 519 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 PDIA5Q14554 519 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 TPRNQ4KMQ1 711 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 AXDND1Q5T1B0 1012 aaPredicted RBP10.76□□□□□ -0.69
HMG20B-210ENST00000483417 IER5Q5VY09 327 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 MTHFD1LQ6UB35 978 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 CATSPER3Q86XQ3 398 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 TPH2Q8IWU9 490 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 KIAA0319LQ8IZA0 1049 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 NME8Q8N427 588 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 IGSF22Q8N9C0 903 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 LRRC15Q8TF66 581 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
HMG20B-210ENST00000483417 PLIN2Q99541 437 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 PANK2Q9BZ23 570 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 CELF4Q9BZC1 486 aaKnown RBP10.76□□□□□ -0.69
HMG20B-210ENST00000483417 CSRNP2Q9H175 543 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 ZNF302Q9NR11 478 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 PCDHA7Q9UN72 937 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
HMG20B-210ENST00000483417 KDM3AQ9Y4C1 1321 aa10.76□□□□□ -0.69
HMG20B-210ENST00000483417 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 WDR64B1ANS9 1081 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 SPTLC2O15270 562 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
HMG20B-210ENST00000483417 UPP2O95045 317 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 BMP1P13497 986 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 PRPHP41219 470 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 TMEM62Q0P6H9 643 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 ORC2Q13416 577 aaPredicted RBP10.75□□□□□ -0.69
HMG20B-210ENST00000483417 STK38Q15208 465 aa10.75□□□□□ -0.69
HMG20B-210ENST00000483417 ZNF484Q5JVG2 852 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms