RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CCDC88AQ3V6T2 1871 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 ANP32DO95626 131 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 BAG3O95817 575 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 CYP11B2P19099 503 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 CASP4P49662 377 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 POU5F1Q01860 360 aaKnown RBP22.48■■□□□ 1.19
COL13A1-208ENST00000479733 DPY19L2P1Q6NXN4 242 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 SLFN11Q7Z7L1 901 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 DBR1Q9UK59 544 aaKnown RBP22.48■■□□□ 1.19
COL13A1-208ENST00000479733 ZNF652Q9Y2D9 606 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 STRCQ7RTU9 1775 aa22.48■■□□□ 1.19
COL13A1-208ENST00000479733 MKRN4PQ13434 485 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-208ENST00000479733 SYCE1Q8N0S2 351 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 ERP44Q9BS26 406 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 TRIM6Q9C030 488 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-208ENST00000479733 GCNT4Q9P109 453 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 PCDHB13Q9Y5F0 798 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 POTEFA5A3E0 1075 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 AKAP3O75969 853 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 POTEIP0CG38 1075 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 FGFR4P22455 802 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 POTEGQ6S5H5 508 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 POTEEQ6S8J3 1075 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 SEC14L1Q92503 715 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 PRCCQ92733 491 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-208ENST00000479733 PABPC3Q9H361 631 aaKnown RBP22.47■■□□□ 1.19
COL13A1-208ENST00000479733 KIF2BQ8N4N8 673 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 IKZF4Q9H2S9 585 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 MLXIPLQ9NP71 852 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 SLC12A4Q9UP95 1085 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 KIAA1551Q9HCM1 1747 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 IGSF9BQ9UPX0 1349 aa22.47■■□□□ 1.19
COL13A1-208ENST00000479733 MMP13P45452 471 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 ORC2Q13416 577 aaPredicted RBP22.46■■□□□ 1.19
COL13A1-208ENST00000479733 PIGWQ7Z7B1 504 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 AGAP11Q8TF27 550 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 ZDHHC18Q9NUE0 388 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 RTCBQ9Y3I0 505 aaKnown RBP22.46■■□□□ 1.19
COL13A1-208ENST00000479733 UBOX5O94941 541 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 SEPT2Q15019 361 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 ARSHQ5FYA8 562 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 OTUD6AQ7L8S5 288 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 CENPTQ96BT3 561 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 C18orf8Q96DM3 657 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 TXLNGYQ9BZA5 131 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 STK38LQ9Y2H1 464 aa22.46■■□□□ 1.19
COL13A1-208ENST00000479733 CCDC169A6NNP5 214 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 SLC16A2P36021 539 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 PABPC4Q13310 644 aaKnown RBP eCLIP22.45■■□□□ 1.18
COL13A1-208ENST00000479733 DUPD1Q68J44 220 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 NEDD1Q8NHV4 660 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 LNX1Q8TBB1 728 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-208ENST00000479733 ESYT2A0FGR8 921 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 PDE6BP35913 854 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 PTENP60484 403 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 PSMC6P62333 389 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 NAIF1Q69YI7 327 aaPredicted RBP22.45■■□□□ 1.18
COL13A1-208ENST00000479733 FOXR2Q6PJQ5 311 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 CCDC25Q86WR0 208 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 JAMLQ86YT9 394 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 DYDC1Q8WWB3 177 aa22.45■■□□□ 1.18
COL13A1-208ENST00000479733 ASAP2O43150 1006 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 KLRC3Q07444 240 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 LLGL1Q15334 1064 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 SFR1Q86XK3 245 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 NT5C3AQ9H0P0 336 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 RIOX1Q9H6W3 641 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 ZNF287Q9HBT7 754 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 ANKIB1Q9P2G1 1089 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 LAMB1P07942 1786 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 GOLGA6L10A0A0M3HER8 536 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 EIF4E1BA6NMX2 242 aaKnown RBP22.44■■□□□ 1.18
COL13A1-208ENST00000479733 TMEM110-MUSTN1A8MSY1 372 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 A8MUI8 341 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 EVI5O60447 810 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 MED24O75448 989 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 RFC4P35249 363 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 KCNA1Q09470 495 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 KIAA1755Q5JYT7 1200 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 CHORDC1Q9UHD1 332 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-208ENST00000479733 RAD21O60216 631 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 EPHA7Q15375 998 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 TTBK2Q6IQ55 1244 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 SIX2Q9NPC8 291 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 TRPC6Q9Y210 931 aa22.44■■□□□ 1.18
COL13A1-208ENST00000479733 TULP1O00294 542 aaPredicted RBP22.43■■□□□ 1.18
COL13A1-208ENST00000479733 DDX3YO15523 660 aaKnown RBP22.43■■□□□ 1.18
COL13A1-208ENST00000479733 PRKCIP41743 596 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 EDRF1Q3B7T1 1238 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 ARHGEF26Q96DR7 871 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 FOXO6A8MYZ6 492 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 DIAPH2O60879 1101 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 RTN2O75298 545 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 HOXD13P35453 343 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 BTDP43251 543 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 KNOP1Q1ED39 458 aaKnown RBP22.43■■□□□ 1.18
COL13A1-208ENST00000479733 ZDHHC24Q6UX98 284 aa22.43■■□□□ 1.18
COL13A1-208ENST00000479733 FRMD5Q7Z6J6 570 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms