RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 GRAPLQ8TC17 118 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 RASGRP4Q8TDF6 673 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 DYNLL2Q96FJ2 89 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 UBE2TQ9NPD8 197 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 KIF17Q9P2E2 1029 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 CAPN2P17655 700 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 RPS6KB1P23443 525 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PSMC1P62191 440 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 PRAMEP78395 509 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 STARD3Q14849 445 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SWSAP1Q6NVH7 229 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 DEFB132Q7Z7B7 95 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 NSUN7Q8NE18 718 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 ANKRD49Q8WVL7 239 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PIGSQ96S52 555 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 RAB17Q9H0T7 212 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 TNKSO95271 1327 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L15C9J2P7 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L13C9JLJ4 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L11C9JVI0 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L18D6R9N7 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L22D6RA61 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L17D6RBQ6 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L19D6RCP7 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L20D6RJB6 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 E2F6O75461 281 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 HSPA8P11142 646 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 HPGDP15428 266 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 AKAP5P24588 427 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PSMA2P25787 234 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 GUCY2FP51841 1108 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 ALDH18A1P54886 795 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 USP17L24Q0WX57 530 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 MKRN4PQ13434 485 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 ERICH1Q86X53 443 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SENP6Q9GZR1 1112 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 FAM217BQ9NTX9 383 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 KIAA0232Q92628 1395 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SFI1A8K8P3 1242 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SLC27A2O14975 620 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 OPHN1O60890 802 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SCG2P13521 617 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 STAT3P40763 770 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 NDUFV1P49821 464 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 CSE1LP55060 971 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 EXOC3L4Q17RC7 722 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 HEY1Q9Y5J3 304 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 GOLGA8QA0A0J9YX86 632 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 GOLGA8OA6NCC3 632 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 GOLGA8NF8WBI6 632 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 KDM1AO60341 852 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 TAC1P20366 129 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PSMC2P35998 433 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 MTMR2Q13614 643 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SNX17Q15036 470 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 G2E3Q7L622 706 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 MRPL50Q8N5N7 158 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 EXD1Q8NHP7 514 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 DNAJC1Q96KC8 554 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 ECT2Q9H8V3 914 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.16□□□□□ -1.26
TTC3-215ENST00000476784 RGS16O15492 202 aaPredicted RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 CAVIN2O95810 425 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 PYGBP11216 843 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 KRT20P35900 424 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 EZH2Q15910 746 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 PASD1Q8IV76 773 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 NSUN6Q8TEA1 469 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 PNKPQ96T60 521 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 CIPCQ9C0C6 399 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 THG1LQ9NWX6 298 aaKnown RBP7.16□□□□□ -1.26
TTC3-215ENST00000476784 ALKBH4Q9NXW9 302 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 SUN2Q9UH99 717 aa7.16□□□□□ -1.26
TTC3-215ENST00000476784 ZC3H11AO75152 810 aaKnown RBP eCLIP7.15□□□□□ -1.26
TTC3-215ENST00000476784 URODP06132 367 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 ITGA4P13612 1032 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 PHKG2P15735 406 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 NCF2P19878 526 aaPredicted RBP7.15□□□□□ -1.26
TTC3-215ENST00000476784 RFWD2Q8NHY2 731 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 L3MBTL3Q96JM7 780 aaPredicted RBP7.15□□□□□ -1.26
TTC3-215ENST00000476784 NAPGQ99747 312 aaPredicted RBP7.15□□□□□ -1.26
TTC3-215ENST00000476784 BHMT2Q9H2M3 363 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 ZFYVE1Q9HBF4 777 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 ARHGAP26Q9UNA1 814 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 NSD2O96028 1365 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 CUTAO60888 179 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 IMPDH2P12268 514 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 ATP6V1C1P21283 382 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 SPDYAQ5MJ70 313 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 KRT40Q6A162 431 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 MMS22LQ6ZRQ5 1243 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 MAGEB5Q9BZ81 275 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 FEM1BQ9UK73 627 aa7.15□□□□□ -1.26
TTC3-215ENST00000476784 RUVBL2Q9Y230 463 aaKnown RBP7.15□□□□□ -1.26
TTC3-215ENST00000476784 LRRD1A4D1F6 860 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms