RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
PTCD3-211ENST00000476215 ZMAT4Q9H898 229 aa6.83□□□□□ -1.32
PTCD3-211ENST00000476215 INCENPQ9NQS7 918 aa6.83□□□□□ -1.32
PTCD3-211ENST00000476215 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
PTCD3-211ENST00000476215 IL13P35225 146 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 SESN3P58005 492 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 PHC1P78364 1004 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 LRRC32Q14392 662 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 RTN4RL1Q86UN2 441 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-211ENST00000476215 FERMT3Q86UX7 667 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 RPUSD2Q8IZ73 545 aaKnown RBP6.82□□□□□ -1.32
PTCD3-211ENST00000476215 ZNF610Q8N9Z0 462 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 COG1Q8WTW3 980 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 E2F7Q96AV8 911 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-211ENST00000476215 BDH2Q9BUT1 245 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 SSBP3Q9BWW4 388 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-211ENST00000476215 MS4A5Q9H3V2 200 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 GALNT8Q9NY28 637 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 SLC5A4Q9NY91 659 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 ZFP69BQ9UJL9 534 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 PHLDB1Q86UU1 1377 aa6.82□□□□□ -1.32
PTCD3-211ENST00000476215 UBA6A0AVT1 1052 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-211ENST00000476215 FBXO21O94952 628 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 MPIG6BO95866 241 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 PLATP00750 562 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 GUCY2FP51841 1108 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 ADCY1Q08828 1119 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 SPATS1Q496A3 300 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 GPR158Q5T848 1215 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 BORAQ6PGQ7 559 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 C7orf31Q8N865 590 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 TUBGCP5Q96RT8 1024 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 TACO1Q9BSH4 297 aaKnown RBP6.81□□□□□ -1.32
PTCD3-211ENST00000476215 AMNQ9BXJ7 453 aa6.81□□□□□ -1.32
PTCD3-211ENST00000476215 NOC2LQ9Y3T9 749 aaKnown RBP6.81□□□□□ -1.32
PTCD3-211ENST00000476215 LCHNA4D1U4 455 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 ALG1L2C9J202 215 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 PPM1GO15355 546 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-211ENST00000476215 B4GALT3O60512 393 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 TTC38Q5R3I4 469 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 LRSAM1Q6UWE0 723 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 NECAB2Q7Z6G3 386 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 FAM124AQ86V42 546 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 PHYKPLQ8IUZ5 450 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 KLHL36Q8N4N3 616 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 CALML6Q8TD86 181 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 FOXB1Q99853 325 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 KCND1Q9NSA2 647 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 HOMER2Q9NSB8 354 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
PTCD3-211ENST00000476215 KDM1AO60341 852 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 PRKD3O94806 890 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 KLHL18O94889 574 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 APOL3O95236 402 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 IL18BPO95998 194 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 KNG1P01042 644 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 PRLP01236 227 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 ECE1P42892 770 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 SLC6A3Q01959 620 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 ALDH6A1Q02252 535 aaKnown RBP6.79□□□□□ -1.32
PTCD3-211ENST00000476215 ROM1Q03395 351 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 PLP2Q04941 152 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 TBC1D10BQ4KMP7 808 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-211ENST00000476215 PRAMEF9Q5VWM5 478 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 TIGD7Q6NT04 549 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-211ENST00000476215 FRMD7Q6ZUT3 714 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 RASSF3Q86WH2 238 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 TTC9BQ8N6N2 239 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 ZNF496Q96IT1 587 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-211ENST00000476215 MAML3Q96JK9 1138 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 ZDHHC5Q9C0B5 715 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 POFUT1Q9H488 388 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 USP36Q9P275 1121 aaKnown RBP6.79□□□□□ -1.32
PTCD3-211ENST00000476215 INVSQ9Y283 1065 aa6.79□□□□□ -1.32
PTCD3-211ENST00000476215 KATNA1O75449 491 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 ADRB1P08588 477 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 RGS3P49796 1198 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 FAPQ12884 760 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 SURF1Q15526 300 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 SLFN12LQ6IEE8 588 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 DPP8Q6V1X1 898 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-211ENST00000476215 PRRT2Q7Z6L0 340 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-211ENST00000476215 PLEKHH3Q7Z736 793 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 CNTD1Q8N815 330 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 BTBD2Q9BX70 525 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 PUS7LQ9H0K6 701 aaKnown RBP6.78□□□□□ -1.32
PTCD3-211ENST00000476215 TMEM168Q9H0V1 697 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 OR10A5Q9H207 317 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 L2HGDHQ9H9P8 463 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
PTCD3-211ENST00000476215 K7ESM1 405 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 EPHB4P54760 987 aa6.77□□□□□ -1.33
PTCD3-211ENST00000476215 IL13RA1P78552 427 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms