RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 EFCAB12Q6NXP0 572 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 PSRC1Q6PGN9 363 aaPredicted RBP18.91■□□□□ 0.62
SCAF11-206ENST00000474828 POTEGQ6S5H5 508 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 USP38Q8NB14 1042 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 SNX29Q8TEQ0 813 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 HERVK_113Q902F9 699 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.91■□□□□ 0.626e-7■□□□□ 11.3
SCAF11-206ENST00000474828 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
SCAF11-206ENST00000474828 UBE2OQ9C0C9 1292 aaKnown RBP18.91■□□□□ 0.62
SCAF11-206ENST00000474828 CCSER1Q9C0I3 900 aa18.91■□□□□ 0.62
SCAF11-206ENST00000474828 LAMA2P24043 3122 aaKnown RBP18.91■□□□□ 0.62
SCAF11-206ENST00000474828 SIP14410 1827 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 DGAT1O75907 488 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 TMOD1P28289 359 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 CDC25AP30304 524 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 CCT6AP40227 531 aaKnown RBP18.9■□□□□ 0.62
SCAF11-206ENST00000474828 CDC42EP1Q00587 391 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 TMEM119Q4V9L6 283 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 FBXO47Q5MNV8 452 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 TDHQ8IZJ6 230 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 PIGOQ8TEQ8 1089 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 PNMA5Q96PV4 448 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 OSBPL7Q9BZF2 842 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 ADAMTS10Q9H324 1103 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 XPNPEP1Q9NQW7 623 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
SCAF11-206ENST00000474828 CLCN3P51790 818 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 NUCB2P80303 420 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 GRB10Q13322 594 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 DRP2Q13474 957 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 LPIN1Q14693 890 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 SHHQ15465 462 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 XKR9Q5GH70 373 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 C9orf50Q5SZB4 431 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 TRMT1LQ7Z2T5 733 aaKnown RBP18.89■□□□□ 0.61
SCAF11-206ENST00000474828 LRRC71Q8N4P6 559 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 SLC7A3Q8WY07 619 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 SH2D3AQ9BRG2 576 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 FAM49AQ9H0Q0 323 aaPredicted RBP18.89■□□□□ 0.61
SCAF11-206ENST00000474828 CFAP45Q9UL16 551 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 TRPV2Q9Y5S1 764 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 CDY2AQ9Y6F7 541 aa18.89■□□□□ 0.61
SCAF11-206ENST00000474828 SCN5AQ14524 2016 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 SPTLC2O15270 562 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 BAIAP3O94812 1187 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 EYA4O95677 639 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 FGBP02675 491 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 MARCKSP29966 332 aaPredicted RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 CRYBB1P53674 252 aaPredicted RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 LRIT3Q3SXY7 679 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 CNKSR3Q6P9H4 555 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 ZNF365Q70YC5 407 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 KCNK18Q7Z418 384 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 KRI1Q8N9T8 703 aaKnown RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 CSRNP2Q9H175 543 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 DDX19AQ9NUU7 478 aaKnown RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
SCAF11-206ENST00000474828 KIAA1024Q9UPX6 916 aa18.88■□□□□ 0.61
SCAF11-206ENST00000474828 CTSHP09668 335 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 ACRP10323 421 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 ARL2P36404 184 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 DNM2P50570 870 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 GPC3P51654 580 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 DNM1Q05193 864 aaKnown RBP18.87■□□□□ 0.61
SCAF11-206ENST00000474828 POU5F1BQ06416 359 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 EMC2Q15006 297 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 TCTN1Q2MV58 587 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
SCAF11-206ENST00000474828 TSHZ1Q6ZSZ6 1077 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 CABP7Q86V35 215 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 METTL13Q8N6R0 699 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 KCNG4Q8TDN1 519 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 TCP11Q8WWU5 503 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 CDHR5Q9HBB8 845 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 ATP6V1DQ9Y5K8 247 aa18.87■□□□□ 0.61
SCAF11-206ENST00000474828 TET1Q8NFU7 2136 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 ASAP2O43150 1006 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 VTNP04004 478 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 CYP11B2P19099 503 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 ANP32AP39687 249 aaKnown RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 UBA7P41226 1012 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 POLGP54098 1239 aaPredicted RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 CEBPZQ03701 1054 aaKnown RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 FOXD4L5Q5VV16 416 aaPredicted RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 USP49Q70CQ1 688 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 IFNLR1Q8IU57 520 aaPredicted RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 DBF4BQ8NFT6 615 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 LRRC15Q8TF66 581 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 TMEM40Q8WWA1 233 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 FOXD4L4Q8WXT5 416 aaPredicted RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 APBB2Q92870 758 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 AGO3Q9H9G7 860 aaKnown RBP18.86■□□□□ 0.61
SCAF11-206ENST00000474828 SUGCTQ9HAC7 445 aa18.86■□□□□ 0.61
SCAF11-206ENST00000474828 EVPLQ92817 2033 aa18.85■□□□□ 0.61
SCAF11-206ENST00000474828 LOXHD1Q8IVV2 1947 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms