RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 ALKBH5Q6P6C2 394 aaKnown RBP16.04■□□□□ 0.16
CBWD3-205ENST00000469687 ACBD3Q9H3P7 528 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 PSD3Q9NYI0 1048 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 TSKSQ9UJT2 592 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-205ENST00000469687 GFPT2O94808 682 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 GLI1P08151 1106 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
CBWD3-205ENST00000469687 PRKCIP41743 596 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 TRAF1Q13077 416 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 DAW1Q8N136 415 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
CBWD3-205ENST00000469687 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 TEKT3Q9BXF9 490 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 CCPG1Q9ULG6 757 aa16.04■□□□□ 0.16
CBWD3-205ENST00000469687 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 HIP1RO75146 1068 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 KCNA3P22001 575 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 MAPK7Q13164 816 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 FAM160B2Q86V87 743 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 OLIG1Q8TAK6 271 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 AGPAT3Q9NRZ7 376 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 NENFQ9UMX5 172 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 TISP43B9A030 160 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 DDX3XO00571 662 aaKnown RBP eCLIP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 TBC1D12O60347 775 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 PTGER2P43116 358 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 NOP2P46087 812 aaKnown RBP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 KCTD17Q8N5Z5 321 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
CBWD3-205ENST00000469687 PSMD1Q99460 953 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 STK32BQ9NY57 414 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
CBWD3-205ENST00000469687 WNT10BO00744 389 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 PLA2G6O60733 806 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 DPEP1P16444 411 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 FMO5P49326 533 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 HSD17B4P51659 736 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 RTKN2Q8IZC4 609 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 CPXCR1Q8N123 301 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 HOOK2Q96ED9 719 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 EHMT1Q9H9B1 1298 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 KCNH7Q9NS40 1196 aa16.02■□□□□ 0.16
CBWD3-205ENST00000469687 BZW2Q9Y6E2 419 aaKnown RBP16.02■□□□□ 0.16
CBWD3-205ENST00000469687 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.15
CBWD3-205ENST00000469687 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 EVI5O60447 810 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 ICAM1P05362 532 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 CAPN2P17655 700 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 RXRBP28702 533 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 NFIL3Q16649 462 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 TRMT1LQ7Z2T5 733 aaKnown RBP16.02■□□□□ 0.15
CBWD3-205ENST00000469687 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.15
CBWD3-205ENST00000469687 CLEC4DQ8WXI8 215 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 KRT12Q99456 494 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 DMAC2Q9NW81 257 aa16.02■□□□□ 0.15
CBWD3-205ENST00000469687 TMEM150BA6NC51 233 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 F8VZ95 297 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 KCNK3O14649 394 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 FLOT1O75955 427 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 CARSP49589 748 aaKnown RBP16.01■□□□□ 0.15
CBWD3-205ENST00000469687 SPP2Q13103 211 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
CBWD3-205ENST00000469687 TRADDQ15628 312 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
CBWD3-205ENST00000469687 GPR88Q9GZN0 384 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 ODF2LQ9ULJ1 636 aa16.01■□□□□ 0.15
CBWD3-205ENST00000469687 GOLGA6BA6NDN3 693 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 DHX15O43143 795 aaKnown RBP16■□□□□ 0.15
CBWD3-205ENST00000469687 LRRN2O75325 713 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 PPP1R37O75864 691 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 HEXIM1O94992 359 aaKnown RBP16■□□□□ 0.15
CBWD3-205ENST00000469687 KIF4AO95239 1232 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 EGFRP00533 1210 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 ASNSP08243 561 aa16■□□□□ 0.15
CBWD3-205ENST00000469687 C10orf76Q5T2E6 689 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms