RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 FSD1LQ9BXM9 530 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 PACSIN2Q9UNF0 486 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 MROH2AA6NES4 1674 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 LRRD1A4D1F6 860 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 HADHAP40939 763 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 MXI1P50539 228 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ZNF445P59923 1031 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 MXD4Q14582 209 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 UBE2SQ16763 222 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 IMPG1Q17R60 797 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 MYRIPQ8NFW9 859 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 NCLNQ969V3 563 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 PCDHA7Q9UN72 937 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 SNAP23O00161 211 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 CA4P22748 312 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 SLC8A1P32418 973 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 SLMAPQ14BN4 828 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 LRRC31Q6UY01 552 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 PDCD6IPQ8WUM4 868 aaKnown RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 PHKA2P46019 1235 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 OCRLQ01968 901 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 GABPB1Q06547 395 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 C10orf76Q5T2E6 689 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 FAF2Q96CS3 445 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ATP6V0A4Q9HBG4 840 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 IQANK1A0A1B0GTG1 560 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 K7ERI5 159 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ANP32DO95626 131 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 HABP4Q5JVS0 413 aaKnown RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 PRR5LQ6MZQ0 368 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 TMED8Q6PL24 325 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 CCDC197Q8NCU1 140 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 DYRK4Q9NR20 520 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 TOPORSQ9NS56 1045 aaPredicted RBP9.34□□□□□ -0.91
HPS4-209ENST00000466781 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
HPS4-209ENST00000466781 MST1RQ04912 1400 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 MROH7-TTC4A0A0A0MT08 1334 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 CREB3O43889 395 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 PLA2G4BP0C869 781 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 EEF1B2P24534 225 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 HOXA7P31268 230 aaPredicted RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 ESRRGP62508 458 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 ADCY1Q08828 1119 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TWF2Q6IBS0 349 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 ACRBPQ8NEB7 543 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 SEPT8Q92599 483 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 OTUD5Q96G74 571 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 VPS39Q96JC1 886 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 EDEM3Q9BZQ6 932 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 PGRMC1O00264 195 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 MOCS3O95396 460 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 PSMD2Q13200 908 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 CAPRIN1Q14444 709 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 STXBP2Q15833 593 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TTC23LQ6PF05 361 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 DEFB132Q7Z7B7 95 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 PBKQ96KB5 322 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TUBB6Q9BUF5 446 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TMEM106CQ9BVX2 250 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 SYNDIG1Q9H7V2 258 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 ANLNQ9NQW6 1124 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 CNOT7Q9UIV1 285 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 RICTORQ6R327 1708 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TMEM131LA2VDJ0 1609 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 RPAP1Q9BWH6 1393 aaPredicted RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 GOLGA8IPA6NC78 632 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 GOLGA8JA6NMD2 632 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 CLTAP09496 248 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 ZNF157P51786 506 aaPredicted RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 CTTNQ14247 550 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 ZNF667Q5HYK9 610 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 SCYL3Q8IZE3 742 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 MMP19Q99542 508 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TPX2Q9ULW0 747 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 HUS1O60921 280 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 CASP14P31944 242 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 SNCBQ16143 134 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 TRMT10CQ7L0Y3 403 aaKnown RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
HPS4-209ENST00000466781 NR1H4Q96RI1 486 aaPredicted RBP9.33□□□□□ -0.92
HPS4-209ENST00000466781 MTFR1LQ9H019 292 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms