RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PFKFB3Q16875 520 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 TMEM266Q2M3C6 531 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 EFHBQ8N7U6 833 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 VN1R2Q8NFZ6 395 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZNF274Q96GC6 653 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 POP1Q99575 1024 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 FTHL17Q9BXU8 183 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 KCNH6Q9H252 994 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 AGO4Q9HCK5 861 aaKnown RBP9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 FAM186AA6NE01 2351 aa9.02□□□□□ -0.97
CDC42BPA-210ENST00000462553 C2orf16Q68DN1 1984 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 CCDC196A0A1B0GTZ2 297 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 SMIM35A0A1B0GVV1 85 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 LOC730098B7Z3J9 87 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 MAFGO15525 162 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 PRPF3O43395 683 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 ATG7O95352 703 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 LARGE1O95461 756 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 PYGBP11216 843 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 SARSP49591 514 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 NDUFV1P49821 464 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 AK2P54819 239 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 NAPAP54920 295 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 RBM10P98175 930 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 COASYQ13057 564 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 IER5Q5VY09 327 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 MTHFD1LQ6UB35 978 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 PLPPR4Q7Z2D5 763 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 CCDC60Q8IWA6 550 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 POF1BQ8WVV4 589 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 KIF2CQ99661 725 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 RNF26Q9BY78 433 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 ANO3Q9BYT9 981 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 CELF4Q9BZC1 486 aaKnown RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 ERVK-5Q9HDB9 667 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 RIC8AQ9NPQ8 531 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 TPCN1Q9ULQ1 816 aa9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 BARX2Q9UMQ3 279 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-210ENST00000462553 GVINP1Q7Z2Y8 2422 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 IGLV3-22A0A075B6J6 115 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 ESYT2A0FGR8 921 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 M0QZ92 97 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 ATP4AP20648 1035 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 SREBF1P36956 1147 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 NRIP1P48552 1158 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 STAT5BP51692 787 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 ADCY7P51828 1080 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 KRT76Q01546 638 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 ST3GAL1Q11201 340 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 SCRN1Q12765 414 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 STK3Q13188 491 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 CEP55Q53EZ4 464 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 ABHD15Q6UXT9 468 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 PRSS33Q8NF86 280 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 CRYGNQ8WXF5 182 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 EDAQ92838 391 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 MARVELD3Q96A59 401 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 PHOX2BQ99453 314 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 SDF4Q9BRK5 362 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 SLC26A6Q9BXS9 759 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 AZI2Q9H6S1 392 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 TMEM260Q9NX78 707 aa9□□□□□ -0.97
CDC42BPA-210ENST00000462553 NOC2LQ9Y3T9 749 aaKnown RBP9□□□□□ -0.97
CDC42BPA-210ENST00000462553 USP15Q9Y4E8 981 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-210ENST00000462553 COL1A2P08123 1366 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 ARID2Q68CP9 1835 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 C9IYK1 514 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 FAM86B1E9PN63 330 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 MEIS1O00470 390 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 FSCN2O14926 492 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 DHX15O43143 795 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 PFKFB2O60825 505 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 DTNBO60941 627 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 CTDNEP1O95476 244 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 C22orf31O95567 290 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 FAM86B2P0C5J1 330 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 KLRC1P26715 233 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 SLC26A2P50443 739 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 VASPP50552 380 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 KCNC3Q14003 757 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 NPY5RQ15761 445 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 FAM102BQ5T8I3 360 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 BMP8AQ7Z5Y6 402 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 RBM23Q86U06 439 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 FAM228AQ86W67 206 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 TEX2Q8IWB9 1127 aa8.99□□□□□ -0.97
CDC42BPA-210ENST00000462553 KIAA0319LQ8IZA0 1049 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms