RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CCDC12Q8WUD4 166 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 FBXL18Q96ME1 805 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 NEK1Q96PY6 1258 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 PHF7Q9BWX1 381 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ANO3Q9BYT9 981 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 LSG1Q9H089 658 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ELAC1Q9H777 363 aaKnown RBP9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ATP6V0A4Q9HBG4 840 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ERVK-5Q9HDB9 667 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF302Q9NR11 478 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 TLR9Q9NR96 1032 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 RGS18Q9NS28 235 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 TBC1D22BQ9NU19 505 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 BARHL2Q9NY43 387 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 PLXNA4Q9HCM2 1894 aa9.12□□□□□ -0.95
NIF3L1-209ENST00000454952 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 hCG_1642624A0A1W2PR95 340 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 SMCO2A6NFE2 343 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM221A6NGB7 291 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TBKBP1A7MCY6 615 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 LOC730098B7Z3J9 87 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 M0R296 226 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 MAGEB2O15479 319 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 LINC01565O15544 149 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CSPG5O95196 566 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 HMGB1P09429 215 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 ARP10275 920 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 DNAJB1P25685 340 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 GTF2F1P35269 517 aaKnown RBP eCLIP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 PPM1AP35813 382 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 PTPN5P54829 565 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 FOXK1P85037 733 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 KRT32Q14532 448 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 BMS1Q14692 1282 aaKnown RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CBX2Q14781 532 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF746Q6NUN9 644 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 ABHD15Q6UXT9 468 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 THNSL1Q8IYQ7 743 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CYP2W1Q8TAV3 490 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TRAPPC12Q8WVT3 735 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 RSPH1Q8WYR4 309 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 FAM167AQ96KS9 214 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 ADAM2Q99965 735 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TMX1Q9H3N1 280 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 CLEC1BQ9P126 229 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 GINS2Q9Y248 185 aa9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 USP15Q9Y4E8 981 aaPredicted RBP9.11□□□□□ -0.95
NIF3L1-209ENST00000454952 WDR81Q562E7 1941 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ESYT2A0FGR8 921 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 C9IYK1 514 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 IPO5O00410 1097 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 FGF18O76093 207 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 PSAPP07602 524 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 CYP3A4P08684 503 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 HOXB8P17481 243 aaPredicted RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 TMOD1P28289 359 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ZXDAP98168 799 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 PLCB3Q01970 1234 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 KRT17Q04695 432 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ITGB3BPQ13352 177 aaPredicted RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 DUSP6Q16828 381 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM266Q2M3C6 531 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 DHX32Q7L7V1 743 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ADGRD2Q7Z7M1 963 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 RBM23Q86U06 439 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 PLA2G4DQ86XP0 818 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 KIAA0319LQ8IZA0 1049 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 LRRC43Q8N309 656 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 PBXIP1Q96AQ6 731 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ZBTB10Q96DT7 871 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM117Q9H0C3 514 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 NGRNQ9NPE2 291 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM260Q9NX78 707 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 ST3GAL5Q9UNP4 418 aa9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 NOC2LQ9Y3T9 749 aaKnown RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
NIF3L1-209ENST00000454952 GOLGA8AA7E2F4 631 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 GOLGA8BA8MQT2 603 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 DDX39AO00148 427 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 PPFIA3O75145 1194 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 GLP2RO95838 553 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 CCNE2O96020 404 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 ZSCAN20P17040 1043 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 GNA11P29992 359 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 CLK2P49760 499 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 FAM189BP81408 668 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms