RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ARFGAP3Q9NP61 516 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 PPP2R2CQ9Y2T4 447 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 MRFAP1Q9Y605 127 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 ATG7O95352 703 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 SERPINC1P01008 464 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 GNRH1P01148 92 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 CASP1P29466 404 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 SARSP49591 514 aaKnown RBP17.5■□□□□ 0.39
SNX17-204ENST00000453453 PSMC6P62333 389 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 CCL14Q16627 93 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 MFSD14CQ5VZR4 134 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 SWSAP1Q6NVH7 229 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 CARD6Q9BX69 1037 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 ZNF302Q9NR11 478 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 ST7Q9NRC1 585 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
SNX17-204ENST00000453453 A0A087WWV3 80 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 CCDC151A5D8V7 595 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 ARHGEF35A5YM69 484 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 ERICH4A6NGS2 130 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 MYMKA6NI61 221 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 FKTNO75072 461 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 ADCYAP1R1P41586 468 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 FLT3LGP49771 235 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 SLC12A3P55017 1021 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 HNRNPH2P55795 449 aaKnown RBP17.49■□□□□ 0.39
SNX17-204ENST00000453453 OTUD6AQ7L8S5 288 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 CD99L2Q8TCZ2 262 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 DDX12PQ92771 950 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 GOLGA1Q92805 767 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 AZI2Q9H6S1 392 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 KCND2Q9NZV8 630 aa17.49■□□□□ 0.39
SNX17-204ENST00000453453 DBR1Q9UK59 544 aaKnown RBP17.49■□□□□ 0.39
SNX17-204ENST00000453453 TUBBP07437 444 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 YWHABP31946 246 aaKnown RBP17.48■□□□□ 0.39
SNX17-204ENST00000453453 PRKCZQ05513 592 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 PPP2R3AQ06190 1150 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 MORC3Q14149 939 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 KCNB1Q14721 858 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 UGCGQ16739 394 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 DUSP28Q4G0W2 176 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
SNX17-204ENST00000453453 HNRNPLLQ8WVV9 542 aaKnown RBP17.48■□□□□ 0.39
SNX17-204ENST00000453453 EMID1Q96A84 441 aaPredicted RBP17.48■□□□□ 0.39
SNX17-204ENST00000453453 ANKEF1Q9NU02 776 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 WRAP73Q9P2S5 460 aaPredicted RBP17.48■□□□□ 0.39
SNX17-204ENST00000453453 GABRQQ9UN88 632 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 IGSF9BQ9UPX0 1349 aa17.48■□□□□ 0.39
SNX17-204ENST00000453453 PVALEFA0A1B0GWK0 134 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 GSTTP1A0A1W2PQM5 241 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 TCF7P36402 384 aaPredicted RBP17.47■□□□□ 0.39
SNX17-204ENST00000453453 TNFAIP2Q03169 654 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 ARHGAP1Q07960 439 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 UNC13DQ70J99 1090 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 CCDC65Q8IXS2 484 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 COPS5Q92905 334 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 GPR20Q99678 358 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 SRRDQ9UH36 339 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 ARID2Q68CP9 1835 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 IGKV6D-21A0A0A0MT36 114 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 IDEP14735 1019 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 CYP11B2P19099 503 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 OAS2P29728 719 aaKnown RBP17.47■□□□□ 0.39
SNX17-204ENST00000453453 PRKCEQ02156 737 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
SNX17-204ENST00000453453 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 MLKLQ8NB16 471 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 GOLGA5Q8TBA6 731 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 FAM167AQ96KS9 214 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
SNX17-204ENST00000453453 NAA15Q9BXJ9 866 aaKnown RBP17.47■□□□□ 0.39
SNX17-204ENST00000453453 FAM184BQ9ULE4 1060 aa17.47■□□□□ 0.39
SNX17-204ENST00000453453 TBCAO75347 108 aaKnown RBP17.46■□□□□ 0.39
SNX17-204ENST00000453453 ZNF865P0CJ78 1059 aaPredicted RBP17.46■□□□□ 0.39
SNX17-204ENST00000453453 SMPD1P17405 629 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 STAT5BP51692 787 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 HSDL1Q3SXM5 330 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 XKR9Q5GH70 373 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 PRAMEF19Q5SWL8 479 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 OR6J1Q8NGC5 347 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 PPTC7Q8NI37 304 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 GLG1Q92896 1179 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
SNX17-204ENST00000453453 MAFBQ9Y5Q3 323 aaPredicted RBP17.46■□□□□ 0.39
SNX17-204ENST00000453453 EMSYQ7Z589 1322 aa17.46■□□□□ 0.38
SNX17-204ENST00000453453 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.45■□□□□ 0.38
SNX17-204ENST00000453453 KLRC4O43908 158 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 RHOBTB3O94955 611 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 RARRES1P49788 294 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 ZNF658Q5TYW1 1059 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms