RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 NCAPHQ15003 741 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 SPOUT1Q5T280 376 aaKnown RBP8.34□□□□□ -1.07
RIF1-206ENST00000453091 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 RNPC3Q96LT9 517 aaKnown RBP8.34□□□□□ -1.07
RIF1-206ENST00000453091 ZNF341Q9BYN7 854 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 PCSK1NQ9UHG2 260 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 SERPINB13Q9UIV8 391 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 ANAPC7Q9UJX3 599 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 CPDO75976 1380 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 NEO1Q92859 1461 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 SPECC1L-ADORA2AF8WAN1 911 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 SRGAP2CP0DJJ0 459 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 ECE1P42892 770 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 EN1Q05925 392 aaPredicted RBP8.34□□□□□ -1.07
RIF1-206ENST00000453091 DRAP1Q14919 205 aaPredicted RBP8.34□□□□□ -1.07
RIF1-206ENST00000453091 ARHGEF18Q6ZSZ5 1173 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 ELMO3Q96BJ8 720 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 CEP95Q96GE4 821 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 PPP1R36Q96LQ0 422 aa8.34□□□□□ -1.07
RIF1-206ENST00000453091 TARBP1Q13395 1621 aaKnown RBP8.34□□□□□ -1.07
RIF1-206ENST00000453091 PFDN1O60925 122 aa8.34□□□□□ -1.08
RIF1-206ENST00000453091 ESRRAP11474 423 aaPredicted RBP8.34□□□□□ -1.08
RIF1-206ENST00000453091 ARL8AQ96BM9 186 aa8.34□□□□□ -1.08
RIF1-206ENST00000453091 CD209Q9NNX6 404 aa8.34□□□□□ -1.08
RIF1-206ENST00000453091 ABCF3Q9NUQ8 709 aa8.34□□□□□ -1.08
RIF1-206ENST00000453091 RASA4BC9J798 803 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 RASA4O43374 803 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 DTX3LQ8TDB6 740 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 FAM149B1Q96BN6 582 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 RAD51CO43502 376 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 CHN1P15882 459 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 RWDD2BP57060 319 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 MMEL1Q495T6 779 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ASPRV1Q53RT3 343 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 THNSL1Q8IYQ7 743 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ENGASEQ8NFI3 743 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 MRPL46Q9H2W6 279 aaKnown RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 KLC4Q9NSK0 619 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 PPARGC1AQ9UBK2 798 aaKnown RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 AKT3Q9Y243 479 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 A2ML1A8K2U0 1454 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 NR1I3Q14994 352 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 CCNI2Q6ZMN8 369 aaPredicted RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 RGS9BPQ6ZS82 235 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 AFF2P51816 1311 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 EPC2Q52LR7 807 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 DNAJC24Q6P3W2 148 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 KCTD6Q8NC69 237 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 FUCA2Q9BTY2 467 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ARHGEF5Q12774 1597 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 INO80B-WBP1J3KQ70 363 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 TGS1Q96RS0 853 aaKnown RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 INO80BQ9C086 356 aaPredicted RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 MAGEF1Q9HAY2 307 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ADD3Q9UEY8 706 aaKnown RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 ABCC3O15438 1527 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ANO9A1A5B4 782 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 MAP3K7O43318 606 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 CPP00450 1065 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 RAD23BP54727 409 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 GRAMD1BQ3KR37 738 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 SLC30A5Q8TAD4 765 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 CXorf38Q8TB03 319 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 NUP85Q9BW27 656 aa8.33□□□□□ -1.08
RIF1-206ENST00000453091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■■■■□ 20.8
RIF1-206ENST00000453091 TRPC5Q9UL62 973 aaPredicted RBP8.33□□□□□ -1.08
RIF1-206ENST00000453091 BRAFP15056 766 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 DBN1Q16643 649 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 JADE1Q6IE81 842 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 SLC30A10Q6XR72 485 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 IGDCC4Q8TDY8 1250 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 TTC1Q99614 292 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CYP4F11Q9HBI6 524 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ETNK1Q9HBU6 452 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 TUBE1Q9UJT0 475 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 CAPN9O14815 690 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ECE2O60344 883 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 SLC8A3P57103 927 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 NFIXQ14938 502 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 SLMAPQ14BN4 828 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 DCPSQ96C86 337 aaKnown RBP8.32□□□□□ -1.08
RIF1-206ENST00000453091 HDAC11Q96DB2 347 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 EHD4Q9H223 541 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 RGL1Q9NZL6 768 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ZFP69BQ9UJL9 534 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 GSTA1P08263 222 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 GSTA2P09210 222 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 SLC9A1P19634 815 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 ASPHQ12797 758 aa8.32□□□□□ -1.08
RIF1-206ENST00000453091 LRRC36Q1X8D7 754 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms