RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TRIM59Q8IWR1 403 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 SPIRE2Q8WWL2 714 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 SEPT1Q8WYJ6 367 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 PPP1R13BQ96KQ4 1090 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 DEF6Q9H4E7 631 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 ST6GALNAC4Q9H4F1 302 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 PPP2R2CQ9Y2T4 447 aa6.62□□□□□ -1.35
VPS50-205ENST00000441602 EP400Q96L91 3159 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 LOC285556D6RIA3 1793 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CCDC169A6NNP5 214 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 RSPH10B2B2RC85 870 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 STRNO43815 780 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 EXOC3O60645 756 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CCNE2O96020 404 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 RSPH10BP0C881 870 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 NMT1P30419 496 aaKnown RBP6.61□□□□□ -1.35
VPS50-205ENST00000441602 RTP1P59025 263 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 PRKCEQ02156 737 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 GBP6Q6ZN66 633 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CCDC170Q8IYT3 715 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 LSM14BQ9BX40 385 aaKnown RBP6.61□□□□□ -1.35
VPS50-205ENST00000441602 KMT5AQ9NQR1 393 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 ATP9AO75110 1047 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CELF2O95319 508 aaKnown RBP6.61□□□□□ -1.35
VPS50-205ENST00000441602 OATP04181 439 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CCDC172P0C7W6 258 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 FECHP22830 423 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 EDNRBP24530 442 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 POLGP54098 1239 aaPredicted RBP6.61□□□□□ -1.35
VPS50-205ENST00000441602 CNTN2Q02246 1040 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 METTL7BQ6UX53 244 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 ABRAQ8N0Z2 381 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 CEP72Q9P209 647 aa6.61□□□□□ -1.35
VPS50-205ENST00000441602 TTC26A0AVF1 554 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 PDHXO00330 501 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 KIAA0391O15091 583 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 GAS2O43903 313 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 CDK17Q00537 523 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 ABHD15Q6UXT9 468 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 HAUS6Q7Z4H7 955 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 KIAA1328Q86T90 577 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 VPS36Q86VN1 386 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 C12orf56Q8IXR9 622 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SCFD2Q8WU76 684 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 TCP11Q8WWU5 503 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SLC7A3Q8WY07 619 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 DNAJC7Q99615 494 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 RRAGCQ9HB90 399 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 RBPJLQ9UBG7 517 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 POLR2AP24928 1970 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 SOWAHBA6NEL2 793 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SFI1A8K8P3 1242 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CNMDO75829 334 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 GGPS1O95749 300 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 MAPK4P31152 587 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SLC26A2P50443 739 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 FXR1P51114 621 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS50-205ENST00000441602 ETF1P62495 437 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 STRN3Q13033 797 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 TUBB2AQ13885 445 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 DCAF17Q5H9S7 520 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 MIIPQ5JXC2 388 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 DLK2Q6UY11 383 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CYFIP1Q7L576 1253 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 MAEAQ7L5Y9 396 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 CCDC42Q96M95 316 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 TUBB2BQ9BVA1 445 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 ZCCHC17Q9NP64 241 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 VTA1Q9NP79 307 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 MORF4L1Q9UBU8 362 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 MYO6Q9UM54 1294 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 IGSF9BQ9UPX0 1349 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 GTPBP10A4D1E9 387 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 MANSC4A6NHS7 340 aaPredicted RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 MAPK13O15264 365 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 UBA1P22314 1058 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 CASQ1P31415 396 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CYP2J2P51589 502 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 STAT5BP51692 787 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 PEX3P56589 373 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 GOLGA8FQ08AF8 430 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 GOLGA8DPQ0D2H9 430 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 KCNH2Q12809 1159 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 MTERF2Q49AM1 385 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SLC9C1Q4G0N8 1177 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 UTP14CQ5TAP6 766 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 SFMBT2Q5VUG0 894 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 SPRYD7Q5W111 196 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 CHADLQ6NUI6 762 aa6.6□□□□□ -1.35
VPS50-205ENST00000441602 INTS8Q75QN2 995 aaKnown RBP6.6□□□□□ -1.35
VPS50-205ENST00000441602 GLIS3Q8NEA6 775 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms