RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-207ENST00000439974 ATG2AQ2TAZ0 1938 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 ZBTB42B2RXF5 422 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 GRM6O15303 877 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 MMP1P03956 469 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 PSAPP07602 524 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 NFX1Q12986 1120 aaKnown RBP18.11■□□□□ 0.49
ITGB1-207ENST00000439974 COL19A1Q14993 1142 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 LETM2Q2VYF4 491 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 PUS10Q3MIT2 529 aaKnown RBP18.11■□□□□ 0.49
ITGB1-207ENST00000439974 ODR4Q5SWX8 454 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 PTCRAQ6ISU1 281 aaPredicted RBP18.11■□□□□ 0.49
ITGB1-207ENST00000439974 KRT25Q7Z3Z0 450 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 DIS3L2Q8IYB7 885 aaKnown RBP18.11■□□□□ 0.49
ITGB1-207ENST00000439974 LENG9Q96B70 501 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
ITGB1-207ENST00000439974 MRPL42Q9Y6G3 142 aaKnown RBP18.11■□□□□ 0.49
ITGB1-207ENST00000439974 NCK2O43639 380 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 C22orf31O95567 290 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 IL9P15248 144 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 TNFRSF25Q93038 417 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 GABBR1Q9UBS5 961 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 LRFN2Q9ULH4 789 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 NOC2LQ9Y3T9 749 aaKnown RBP18.1■□□□□ 0.49
ITGB1-207ENST00000439974 SAMM50Q9Y512 469 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 WDR81Q562E7 1941 aa18.1■□□□□ 0.49
ITGB1-207ENST00000439974 GRXCR2A6NFK2 248 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 H3BQ06 376 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-207ENST00000439974 MSH4O15457 936 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 SLC37A4O43826 429 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
ITGB1-207ENST00000439974 MCM2P49736 904 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 HMGN5P82970 282 aaKnown RBP18.09■□□□□ 0.49
ITGB1-207ENST00000439974 NAALADL2Q58DX5 795 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 EP400NLQ6ZTU2 488 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 FAM178BQ8IXR5 827 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 FAM177A1Q8N128 213 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-207ENST00000439974 TMEM40Q8WWA1 233 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 P2RX5Q93086 422 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 FAM167AQ96KS9 214 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 EPHX3Q9H6B9 360 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 KIAA1671Q9BY89 1806 aa18.09■□□□□ 0.49
ITGB1-207ENST00000439974 WNT7AO00755 349 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 GPR182O15218 404 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 ATP2B1P20020 1258 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 GJB2P29033 226 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 USP11P51784 963 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.48
ITGB1-207ENST00000439974 PAN2Q504Q3 1202 aaKnown RBP18.08■□□□□ 0.48
ITGB1-207ENST00000439974 TRMT1LQ7Z2T5 733 aaKnown RBP18.08■□□□□ 0.48
ITGB1-207ENST00000439974 METTL13Q8N6R0 699 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 ALG13Q9NP73 1137 aaKnown RBP18.08■□□□□ 0.48
ITGB1-207ENST00000439974 CD320Q9NPF0 282 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 C1orf112Q9NSG2 853 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
ITGB1-207ENST00000439974 CLDND1Q9NY35 253 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 ST3GAL5Q9UNP4 418 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 PLAGL2Q9UPG8 496 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.48
ITGB1-207ENST00000439974 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 MAGEB2O15479 319 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 MGEA5O60502 916 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 IBSPP21815 317 aaPredicted RBP18.07■□□□□ 0.48
ITGB1-207ENST00000439974 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 NEK8Q86SG6 692 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 GJD3Q8N144 294 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 PPP1R16BQ96T49 567 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 RIT2Q99578 217 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 OSMRQ99650 979 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 ADAM2Q99965 735 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 DISC1Q9NRI5 854 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 RGS18Q9NS28 235 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 DDX25Q9UHL0 483 aaKnown RBP18.07■□□□□ 0.48
ITGB1-207ENST00000439974 FAM50BQ9Y247 325 aa18.07■□□□□ 0.48
ITGB1-207ENST00000439974 CHMP2AO43633 222 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 CCNT1O60563 726 aaKnown RBP18.06■□□□□ 0.48
ITGB1-207ENST00000439974 GAS7O60861 476 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 GPR32O75388 356 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 CSPG5O95196 566 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 VTNP04004 478 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 OATP04181 439 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 GATMP50440 423 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 JAK3P52333 1124 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 HYAL1Q12794 435 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 CTC1Q2NKJ3 1217 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 SLC24A5Q71RS6 500 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 FBXO18Q8NFZ0 1043 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 SLC5A5Q92911 643 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 KHSRPQ92945 711 aaKnown RBP eCLIP18.06■□□□□ 0.48
ITGB1-207ENST00000439974 MAP7D2Q96T17 732 aa18.06■□□□□ 0.48
ITGB1-207ENST00000439974 TEKT3Q9BXF9 490 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms