RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 EPHB6O15197 1021 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 STX10O60499 249 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 TRIM49P0CI25 452 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 TRIM49CP0CI26 452 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 SMTNP53814 917 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 RAPGEF1Q13905 1077 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 ZNF720Q7Z2F6 126 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
CPSF7-205ENST00000439958 DAW1Q8N136 415 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 SAMD3Q8N6K7 520 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 IWS1Q96ST2 819 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 CNMDO75829 334 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 TXNP10599 105 aaKnown RBP16.54■□□□□ 0.24
CPSF7-205ENST00000439958 HOXD13P35453 343 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
CPSF7-205ENST00000439958 KCNH2Q12809 1159 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 RAD9BQ6WBX8 426 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 FAM186BQ8IYM0 893 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 KMT5AQ9NQR1 393 aa16.54■□□□□ 0.24
CPSF7-205ENST00000439958 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 SPATA31C2B4DYI2 1134 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 MAFGO15525 162 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 TCF7P36402 384 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 DRC1Q96MC2 740 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 SPATA33Q96N06 139 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 CCDC175P0C221 793 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ADORA2AP29274 412 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 B3GNT9Q6UX72 402 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 C4orf19Q8IY42 314 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 PPP1R13LQ8WUF5 828 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 FRMD3A2A2Y4 597 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 SLC26A4O43511 780 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ACTN1P12814 892 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 PBX1P40424 430 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 SMAP1Q8IYB5 467 aaPredicted RBP16.53■□□□□ 0.24
CPSF7-205ENST00000439958 ARID3AQ99856 593 aa16.53■□□□□ 0.24
CPSF7-205ENST00000439958 DENND3A2RUS2 1198 aa16.52■□□□□ 0.24
CPSF7-205ENST00000439958 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
CPSF7-205ENST00000439958 ZCWPW2Q504Y3 356 aa16.52■□□□□ 0.24
CPSF7-205ENST00000439958 SAAL1Q96ER3 474 aa16.52■□□□□ 0.24
CPSF7-205ENST00000439958 ARIH2O95376 493 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 SUPT20HL2P0C7V6 817 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 CYP27A1Q02318 531 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 GHRHRQ02643 423 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 TRIM14Q14142 442 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 KIAA1328Q86T90 577 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 METTL13Q8N6R0 699 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 SPAG5Q96R06 1193 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 OLFML3Q9NRN5 406 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 PDXKO00764 312 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 HNRNPDLO14979 420 aaKnown RBP16.52■□□□□ 0.23
CPSF7-205ENST00000439958 STAT5BP51692 787 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 CYP26C1Q6V0L0 522 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 IFT74Q96LB3 600 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 PANX2Q96RD6 677 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.23
CPSF7-205ENST00000439958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.52■□□□□ 0.23
CPSF7-205ENST00000439958 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.23
CPSF7-205ENST00000439958 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.23
CPSF7-205ENST00000439958 PLS3P13797 630 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 GUCY2CP25092 1073 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
CPSF7-205ENST00000439958 CYP26B1Q9NR63 512 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 ZC3H4Q9UPT8 1303 aaKnown RBP16.51■□□□□ 0.23
CPSF7-205ENST00000439958 TGFB1I1O43294 461 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 MAPK7Q13164 816 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 NEDD9Q14511 834 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
CPSF7-205ENST00000439958 AKR1B10O60218 316 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
CPSF7-205ENST00000439958 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-205ENST00000439958 GNA14O95837 355 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
CPSF7-205ENST00000439958 MOGSQ13724 837 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 TMEM139Q8IV31 216 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 CCDC42Q96M95 316 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 MROH8Q9H579 483 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 AGPAT3Q9NRZ7 376 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 GUCA1BQ9UMX6 200 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 GINS2Q9Y248 185 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
CPSF7-205ENST00000439958 DNAH12Q6ZR08 3092 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms