RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 WNT10BO00744 389 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 KRT14P02533 472 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 MAGEA9P43362 315 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 JAM2P57087 298 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 TRADDQ15628 312 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 CD302Q8IX05 232 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 RUFY1Q96T51 708 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 TYW1Q9NV66 732 aaKnown RBP15.61■□□□□ 0.09
LIG1-202ENST00000427526 STK24Q9Y6E0 443 aa15.61■□□□□ 0.09
LIG1-202ENST00000427526 RSPH10B2B2RC85 870 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 MSH4O15457 936 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 RAD51CO43502 376 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 KIF4AO95239 1232 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 FOSP01100 380 aaPredicted RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 RSPH10BP0C881 870 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 RNASE9P60153 205 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 RPS6KA1Q15418 735 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 SCFD2Q8WU76 684 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 SLC35C1Q96A29 364 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 CCDC43Q96MW1 224 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 VPS33BQ9H267 617 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 BCAS3Q9H6U6 928 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 AJAP1Q9UKB5 411 aaPredicted RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 ATP8B3O60423 1300 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 OPLAHO14841 1288 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 NR3C1P04150 777 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 ZYXQ15942 572 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 EMC10Q5UCC4 262 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 ALKBH5Q6P6C2 394 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 FBXO11Q86XK2 927 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 ACTRT1Q8TDG2 376 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 BORCS6Q96GS4 357 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 METTL14Q9HCE5 456 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 ZBTB21Q9ULJ3 1066 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 KCNK3O14649 394 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 SLC16A3O15427 465 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 EGFRP00533 1210 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 ANXA13P27216 316 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 CASP4P49662 377 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 GNGT1P63211 74 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 EIF1ADQ8N9N8 165 aaKnown RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 WHAMMQ8TF30 809 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 PBKQ96KB5 322 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 POLR3CQ9BUI4 534 aaPredicted RBP15.6■□□□□ 0.09
LIG1-202ENST00000427526 RUSC1Q9BVN2 902 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 TAOK3Q9H2K8 898 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 PRR12Q9ULL5 1215 aa15.6■□□□□ 0.09
LIG1-202ENST00000427526 BHMG1C9JSJ3 638 aaPredicted RBP15.59■□□□□ 0.09
LIG1-202ENST00000427526 TNNC1P63316 161 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 KCNA1Q09470 495 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 CFAP58Q5T655 872 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 DNAAF5Q86Y56 855 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 CYP2W1Q8TAV3 490 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 TAF4BQ92750 862 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 BHMT2Q9H2M3 363 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 ARHGEF10LQ9HCE6 1279 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 SPDYE3A6NKU9 549 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 A6NNZ2 444 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 RPL13P26373 211 aaKnown RBP15.59■□□□□ 0.09
LIG1-202ENST00000427526 TUBB8Q3ZCM7 444 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 DCAF17Q5H9S7 520 aaPredicted RBP15.59■□□□□ 0.09
LIG1-202ENST00000427526 BTNL9Q6UXG8 535 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 SLFN11Q7Z7L1 901 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 MTMR14Q8NCE2 650 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.59■□□□□ 0.09
LIG1-202ENST00000427526 ZBED3Q96IU2 234 aaPredicted RBP15.59■□□□□ 0.09
LIG1-202ENST00000427526 GLIS2Q9BZE0 524 aaPredicted RBP15.59■□□□□ 0.09
LIG1-202ENST00000427526 GOLPH3Q9H4A6 298 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 TMX2Q9Y320 296 aa15.59■□□□□ 0.09
LIG1-202ENST00000427526 PSME4Q14997 1843 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 GTPBP10A4D1E9 387 aaKnown RBP15.58■□□□□ 0.09
LIG1-202ENST00000427526 ANKRD65E5RJM6 399 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 NFKBIEO00221 500 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 EML1O00423 815 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 TGFB1I1O43294 461 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 EYA4O95677 639 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 CYP3A4P08684 503 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 POLD1P28340 1107 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 CYP4A11Q02928 519 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 IFI16Q16666 785 aaKnown RBP15.58■□□□□ 0.09
LIG1-202ENST00000427526 C1orf131Q8NDD1 294 aaKnown RBP15.58■□□□□ 0.09
LIG1-202ENST00000427526 TPCN2Q8NHX9 752 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 BCAS4Q8TDM0 211 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 OLFML3Q9NRN5 406 aa15.58■□□□□ 0.09
LIG1-202ENST00000427526 FLOT1O75955 427 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 ECHS1P30084 290 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 HOXA13P31271 388 aaPredicted RBP15.58■□□□□ 0.08
LIG1-202ENST00000427526 CCT5P48643 541 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 GUCY2FP51841 1108 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 KLHL7Q8IXQ5 586 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 KCTD17Q8N5Z5 321 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.08
LIG1-202ENST00000427526 ISCUQ9H1K1 167 aa15.58■□□□□ 0.08
LIG1-202ENST00000427526 PGAP2Q9UHJ9 254 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms