RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CCDC13Q8IYE1 715 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 RASGEF1CQ8N431 466 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 PAGR1Q9BTK6 254 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 ZMYM2Q9UBW7 1377 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 DNM1LO00429 736 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 FLOT1O75955 427 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 EEF2P13639 858 aaKnown RBP15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 DOK7Q18PE1 504 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 CRY2Q49AN0 593 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 ODF2Q5BJF6 829 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 C1orf131Q8NDD1 294 aaKnown RBP15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 RAPGEF5Q92565 580 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 HES6Q96HZ4 224 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 MBOAT7Q96N66 472 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 DNM3Q9UQ16 869 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 ATP8A1Q9Y2Q0 1164 aa15.45■□□□□ 0.06
TPM3P9-201ENST00000424846 MYO3BQ8WXR4 1341 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CYP3A7-CYP3A51PA0A087WV96 503 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 A6NNZ2 444 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 PHF20L1A8MW92 1017 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 ATP2C2O75185 946 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CYP3A7P24462 503 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 TUBB8Q3ZCM7 444 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SIAH1Q8IUQ4 282 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SLC35G2Q8TBE7 412 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 LRRC4BQ9NT99 713 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 GMNCA6NCL1 334 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 F8VZ95 297 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 PDXKO00764 312 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 TRIM49P0CI25 452 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 TRIM49CP0CI26 452 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 RPA1P27694 616 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 C10orf76Q5T2E6 689 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 BORCS6Q96GS4 357 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 KCNQ5Q9NR82 932 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SUCLA2Q9P2R7 463 aaPredicted RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SWAP70Q9UH65 585 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 ATXN2Q99700 1313 aaKnown RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 MSH4O15457 936 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 DDX3YO15523 660 aaKnown RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 CTTNQ14247 550 aaKnown RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 KRT71Q3SY84 523 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SLF2Q8IX21 1173 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 SLC30A5Q8TAD4 765 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 LRRC45Q96CN5 670 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 GPR88Q9GZN0 384 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 EPB41L4BQ9H329 900 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 BZW2Q9Y6E2 419 aaKnown RBP15.44■□□□□ 0.06
TPM3P9-201ENST00000424846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 CLSTN1O94985 981 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 PPP2R2AP63151 447 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 ACTN3Q08043 901 aaPredicted RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 ALG3Q92685 438 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 C8orf37Q96NL8 207 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 TYW1Q9NV66 732 aaKnown RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 COG5Q9UP83 839 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 OPLAHO14841 1288 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 CAND2O75155 1236 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 HOXA7P31268 230 aaPredicted RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
TPM3P9-201ENST00000424846 SERPINB2P05120 415 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 IBSPP21815 317 aaPredicted RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 SWT1Q5T5J6 900 aaKnown RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 SLFN13Q68D06 897 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 UHMK1Q8TAS1 419 aaKnown RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 CEP89Q96ST8 783 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 THAP2Q9H0W7 228 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 MARCKSL1P49006 195 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 MKRN4PQ13434 485 aaPredicted RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 YTHDF3Q7Z739 585 aaKnown RBP15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 CPNE8Q86YQ8 564 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 SEC14L1Q92503 715 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 SEC16BQ96JE7 1060 aa15.42■□□□□ 0.06
TPM3P9-201ENST00000424846 DDTLA6NHG4 134 aaPredicted RBP15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 CCDC188H7C350 402 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 CHMP2AO43633 222 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 JAG1P78504 1218 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 PPATQ06203 517 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 ARHGAP44Q17R89 818 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 RINT1Q6NUQ1 792 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 ZDHHC14Q8IZN3 488 aa15.41■□□□□ 0.06
TPM3P9-201ENST00000424846 EIF1ADQ8N9N8 165 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms